RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	CKMT1A	P12532	417 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	LYL1	P12980	280 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	AMD1	P17707	334 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	ABCB4	P21439	1286 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	AMPH	P49418	695 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	AK2	P54819	239 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	PTK2B	Q14289	1009 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	CCDC6	Q16204	474 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	GALNTL6	Q49A17	601 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	XKR9	Q5GH70	373 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	ATPAF1	Q5TC12	328 aa	Predicted RBP	2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	STPG1	Q5TH74	334 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	PMS2CL	Q68D20	193 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	RAB11FIP2	Q7L804	512 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	SYTL1	Q8IYJ3	562 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	CNTROB	Q8N137	903 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	PGBD5	Q8N414	524 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	SCAI	Q8N9R8	606 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	RFWD2	Q8NHY2	731 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	MORC4	Q8TE76	937 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	PARD3B	Q8TEW8	1205 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	EID2B	Q96D98	161 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	TMEM41A	Q96HV5	264 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	CCDC136	Q96JN2	1154 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	SGCZ	Q96LD1	299 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	C8orf48	Q96LL4	319 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	KATNAL1	Q9BW62	490 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	KRTAP4-4	Q9BYR3	166 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	GRHL1	Q9NZI5	618 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	FNIP2	Q9P278	1114 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	MALT1	Q9UDY8	824 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	KL	Q9UEF7	1012 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	ABT1	Q9ULW3	272 aa	Known RBP	2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	NFS1	Q9Y697	457 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	RTL1	A6NKG5	1358 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	PSME4	Q14997	1843 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	CDH23	Q9H251	3354 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	DUOX1	Q9NRD9	1551 aa		2.95	□□□□□ -1.94
VAPA-208	ENST00000584796	SOS1	Q07889	1333 aa	Predicted RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	SPEF2	Q9C093	1822 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	GOLGA6L3	A6NEY3	463 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	TIMM23	O14925	209 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	KIF1C	O43896	1103 aa	Known RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	CCNT1	O60563	726 aa	Known RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	EIF3J	O75822	258 aa	Known RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	SERPINB2	P05120	415 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	CYP4B1	P13584	511 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	YWHAQ	P27348	245 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	AVPR2	P30518	371 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	FMO4	P31512	558 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	EPHX2	P34913	555 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	RFC4	P35249	363 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	EPS15	P42566	896 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	CXCR3	P49682	368 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	PEX5	P50542	639 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	RPS6KA3	P51812	740 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	CRIP2	P52943	208 aa	Predicted RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	ST3GAL1	Q11201	340 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	HLTF	Q14527	1009 aa	Known RBP eCLIP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	KRT71	Q3SY84	523 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	DGAT2L7P	Q6IED9	249 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	TYW3	Q6IPR3	259 aa	Known RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	RHBDF2	Q6PJF5	856 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	RINL	Q6ZS11	566 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	BRSK2	Q8IWQ3	736 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	ANKRD44	Q8N8A2	993 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	PTGR2	Q8N8N7	351 aa	Predicted RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	SCMH1	Q96GD3	660 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	PGLYRP2	Q96PD5	576 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	UHRF2	Q96PU4	802 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	GLIS2	Q9BZE0	524 aa	Predicted RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	MMP28	Q9H239	520 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	EVA1A	Q9H8M9	152 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	UBTD1	Q9HAC8	227 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	SEPSECS	Q9HD40	501 aa	Known RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	PRDM8	Q9NQV8	689 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	TMOD3	Q9NYL9	352 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	FBXO40	Q9UH90	709 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	HERC5	Q9UII4	1024 aa	Known RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	PHTF1	Q9UMS5	762 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	C19orf53	Q9UNZ5	99 aa	Predicted RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	MORC2	Q9Y6X9	1032 aa	Predicted RBP	2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	INSR	P06213	1382 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	MRC1	P22897	1456 aa		2.94	□□□□□ -1.94
VAPA-208	ENST00000584796	LRRC37A	A6NMS7	1700 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	REV3L	O60673	3130 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	ANKRD36C	Q5JPF3	1778 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	CHL1	O00533	1208 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	CLGN	O14967	610 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	SYN3	O14994	580 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	XPNPEP2	O43895	674 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	PEX14	O75381	377 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	ACTL6B	O94805	426 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	CH25H	O95992	272 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	ITGA2B	P08514	1039 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	IGHV4-30-4	P0DP06	118 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	GM2A	P17900	193 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	DGKA	P23743	735 aa		2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	SKIV2L2	P42285	1042 aa	Known RBP	2.93	□□□□□ -1.94
VAPA-208	ENST00000584796	GPR12	P47775	334 aa		2.93	□□□□□ -1.94

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