RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 TAS2R13Q9NYV9 303 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 EVLQ9UI08 416 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-217ENST00000584582 SHROOM3Q8TF72 1996 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 MKI67P46013 3256 aaKnown RBP11.33□□□□□ -0.6
TOP3A-217ENST00000584582 VPS26AO75436 327 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 PGM3O95394 542 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 PYGLP06737 847 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 GABRB3P28472 473 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 MC4RP32245 332 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 NAB1Q13506 487 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 COL9A2Q14055 689 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-217ENST00000584582 ARHGEF7Q14155 803 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 ANKS3Q6ZW76 656 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 CIPCQ9C0C6 399 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 OXSMQ9NWU1 459 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 THEGQ9P2T0 379 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 TLR6Q9Y2C9 796 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 FER1L6Q2WGJ9 1857 aa11.33□□□□□ -0.6
TOP3A-217ENST00000584582 NPEPPSL1A6NEC2 478 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 PPP6CO00743 305 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 ENPP3O14638 875 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 CCNT2O60583 730 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 DNAJA2O60884 412 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 NIPSNAP2O75323 286 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 SMNDC1O75940 238 aaKnown RBP eCLIP11.32□□□□□ -0.69e-6■■■■□ 24.8
TOP3A-217ENST00000584582 IPO13O94829 963 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 HGFP14210 728 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 CYP4F8P98187 520 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 RARS2Q5T160 578 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 PAQR3Q6TCH7 311 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 OR6Y1Q8NGX8 325 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 PTCD3Q96EY7 689 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 CORO1BQ9BR76 489 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 TRAF6Q9Y4K3 522 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 RGSL1A5PLK6 1076 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 SLC38A8A6NNN8 435 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 HHLA1C9JL84 531 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 AXIN1O15169 862 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 HOXD8P13378 290 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 KCNA5P22460 613 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 GABRR2P28476 465 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 EEF1DP29692 281 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 PPARGP37231 505 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 KRT72Q14CN4 511 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 USP41Q3LFD5 358 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 RNF220Q5VTB9 566 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 PAOXQ6QHF9 649 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 ZYG11AQ6WRX3 759 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 PIWIL4Q7Z3Z4 852 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 CAMK1DQ8IU85 385 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 PDZD8Q8NEN9 1154 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 SPPL2BQ8TCT7 592 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 ANKRD49Q8WVL7 239 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 NSUN5Q96P11 429 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 C11orf84Q9BUA3 381 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 CRISPLD1Q9H336 500 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 POMPQ9Y244 141 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 RAI2Q9Y5P3 530 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 TNS1Q9HBL0 1735 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 C1orf232A0A0U1RR37 186 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 A0A1W2PQ67 120 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 F8W8V4 182 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 ACSL4O60488 711 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 ADAMTS4O75173 837 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 LRG1P02750 347 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 UGT1A6P19224 532 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 UGT1A1P22309 533 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 UGT1A4P22310 534 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 UGT1A3P35503 534 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 UGT1A5P35504 534 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 TUFMP49411 452 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 CDKN1CP49918 316 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 BOP1Q14137 746 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 ARHGEF6Q15052 776 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 TBCCQ15814 346 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 INSCQ1MX18 579 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 FAM171BQ6P995 826 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 MRPS31Q92665 395 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 GPR22Q99680 433 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 CLPBQ9H078 707 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 OLA1Q9NTK5 396 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 TMEM161AQ9NX61 479 aa11.32□□□□□ -0.6
TOP3A-217ENST00000584582 LSM7Q9UK45 103 aaKnown RBP11.32□□□□□ -0.6
TOP3A-217ENST00000584582 C2orf78A6NCI8 922 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 GNGT2O14610 69 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 SH3BP5O60239 455 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ETS2P15036 469 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 CD1EP15812 388 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 TYMPP19971 482 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 EEF1B2P24534 225 aaKnown RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 PBLDP30039 288 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-217ENST00000584582 ARRB2P32121 409 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 THOP1P52888 689 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 TLE2Q04725 743 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 HSPA14Q0VDF9 509 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 NR6A1Q15406 480 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 TCEA2Q15560 299 aa11.31□□□□□ -0.6
TOP3A-217ENST00000584582 VPS26BQ4G0F5 336 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms