RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 NFU1Q9UMS0 254 aa18.36■□□□□ 0.53
RFFL-211ENST00000584541 CYP8B1Q9UNU6 501 aa18.36■□□□□ 0.53
RFFL-211ENST00000584541 FADS3Q9Y5Q0 445 aa18.36■□□□□ 0.53
RFFL-211ENST00000584541 LRRK1Q38SD2 2015 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 CCDC163A0A0D9SF12 145 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 HEATR9A2RTY3 570 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 FAM86C2PA6NEL3 165 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 LRRC72A6NJI9 287 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 A8MX80 341 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 H0Y858 1186 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 EIF3HO15372 352 aaKnown RBP eCLIP18.35■□□□□ 0.53
RFFL-211ENST00000584541 PCDH8O95206 1070 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 ELFN1P0C7U0 828 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 ADRA1DP25100 572 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 PXNP49023 591 aaPredicted RBP18.35■□□□□ 0.53
RFFL-211ENST00000584541 ADPRHP54922 357 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 PDIA2Q13087 525 aaKnown RBP18.35■□□□□ 0.53
RFFL-211ENST00000584541 MTM1Q13496 603 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 TAF1AQ15573 450 aaPredicted RBP18.35■□□□□ 0.53
RFFL-211ENST00000584541 BBS9Q3SYG4 887 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 TMEM52BQ4KMG9 183 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 PCID2Q5JVF3 399 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 FNBP1LQ5T0N5 605 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 WDR93Q6P2C0 686 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 CRTC1Q6UUV9 634 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 CCDC25Q86WR0 208 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.35■□□□□ 0.53
RFFL-211ENST00000584541 LRRC39Q96DD0 335 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 SMIM14Q96QK8 99 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 RANBP9Q96S59 729 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 PHACTR1Q9C0D0 580 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 ZFYVE1Q9HBF4 777 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 PREBQ9HCU5 417 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 FBXO4Q9UKT5 387 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 ITM2BQ9Y287 266 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 SPO11Q9Y5K1 396 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 EML5Q05BV3 1969 aa18.35■□□□□ 0.53
RFFL-211ENST00000584541 BDP1A6H8Y1 2624 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3DA0A087WVF3 549 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3IA0A087WXS9 549 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3EA0A087X179 549 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3KA0A087X1G2 549 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 MAGEB16A2A368 324 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3FA6NER0 549 aaPredicted RBP18.34■□□□□ 0.53
RFFL-211ENST00000584541 PRR33A8MZF0 331 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3LB9A6J9 549 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 PSMD11O00231 422 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 SLC4A1P02730 911 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3HP0C7X1 549 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 CD6P30203 668 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TAS2R38P59533 333 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 SEMG2Q02383 582 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 CSTF1Q05048 431 aaKnown RBP18.34■□□□□ 0.53
RFFL-211ENST00000584541 DHX9Q08211 1270 aaKnown RBP18.34■□□□□ 0.53
RFFL-211ENST00000584541 USP39Q53GS9 565 aaKnown RBP18.34■□□□□ 0.53
RFFL-211ENST00000584541 LRRC66Q68CR7 880 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3GQ6DHY5 549 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3CQ6IPX1 549 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 NEK5Q6P3R8 708 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 NLRP9Q7RTR0 991 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 LYSMD3Q7Z3D4 306 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 TBC1D3Q8IZP1 549 aaPredicted RBP18.34■□□□□ 0.53
RFFL-211ENST00000584541 PTCD2Q8WV60 388 aaKnown RBP18.34■□□□□ 0.53
RFFL-211ENST00000584541 PWWP2AQ96N64 755 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 NAT9Q9BTE0 207 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 WRAP53Q9BUR4 548 aaKnown RBP18.34■□□□□ 0.53
RFFL-211ENST00000584541 SYBUQ9NX95 663 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 MAD1L1Q9Y6D9 718 aa18.34■□□□□ 0.53
RFFL-211ENST00000584541 SCN8AQ9UQD0 1980 aa18.33■□□□□ 0.53
RFFL-211ENST00000584541 FAM47DPA6NHR8 397 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 GPR37L1O60883 481 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 CLDN7O95471 211 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 SEMA4FO95754 770 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 LPOP22079 712 aaPredicted RBP18.33■□□□□ 0.52
RFFL-211ENST00000584541 LHCGRP22888 699 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 RALGDSQ12967 914 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 MSLNQ13421 630 aaPredicted RBP18.33■□□□□ 0.52
RFFL-211ENST00000584541 PTPRRQ15256 657 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 CNGA3Q16281 694 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 KIAA1161Q6NSJ0 714 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 TSSK4Q6SA08 328 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 TSPAN33Q86UF1 283 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 CCNJLQ8IV13 435 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 MYRIPQ8NFW9 859 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 OR2T34Q8NGX1 318 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 STAMBPL1Q96FJ0 436 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 SIGLEC10Q96LC7 697 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 PARD6BQ9BYG5 372 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 MRM3Q9HC36 420 aaKnown RBP18.33■□□□□ 0.52
RFFL-211ENST00000584541 SAYSD1Q9NPB0 183 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 CD93Q9NPY3 652 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 PKD2L2Q9NZM6 624 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 GGT7Q9UJ14 662 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 PKP3Q9Y446 797 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 TCAF1Q9Y4C2 921 aa18.33■□□□□ 0.52
RFFL-211ENST00000584541 TRPM6Q9BX84 2022 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 CEP192Q8TEP8 1941 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 PRR23AA6NEV1 266 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 E7ESA3 106 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 STX7O15400 261 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms