RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 ARFGAP1Q8N6T3 406 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 C1orf131Q8NDD1 294 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 CEP76Q8TAP6 659 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 LPAR1Q92633 364 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 SNAPC3Q92966 411 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 TMEM18Q96B42 140 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 PERPQ96FX8 193 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 PGAM5Q96HS1 289 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 FEM1CQ96JP0 617 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 TMEM68Q96MH6 324 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 YME1L1Q96TA2 773 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 MAK16Q9BXY0 300 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 SMARCAD1Q9H4L7 1026 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 MAP6D1Q9H9H5 199 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 SCPEP1Q9HB40 452 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 PLEKHB1Q9UF11 243 aaPredicted RBP3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 TMEM5Q9Y2B1 443 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 SRPRBQ9Y5M8 271 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 A3GALT2U3KPV4 340 aa3.86□□□□□ -1.79
SMCHD1-209ENST00000583441 A0A1W2PQF6 199 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 A6NNC1 897 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 A8MZ25 164 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 B4DLN1 442 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 ZNF814B7Z6K7 855 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 GRID2O43424 1007 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 HCRTR2O43614 444 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 ATG13O75143 517 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 SLC25A12O75746 678 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 NDUFB4O95168 129 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 CLDN7O95471 211 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 MMP2P08253 660 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 CSH1P0DML2 217 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 CSH2P0DML3 217 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 CHRNB1P11230 501 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 PSG1P11464 419 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 CHRNB2P17787 502 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 HOXD9P28356 352 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 MAPK4P31152 587 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 ZBED6P86452 979 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 ITGADQ13349 1161 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 FGFBP1Q14512 234 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 LPIN1Q14693 890 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 DRAP1Q14919 205 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 ASIC2Q16515 512 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 USP41Q3LFD5 358 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 DUSP28Q4G0W2 176 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 PLEKHS1Q5SXH7 462 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 C6orf141Q5SZD1 244 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 OTUD3Q5T2D3 398 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 CES5AQ6NT32 575 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 PARM1Q6UWI2 310 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 ZNF329Q86UD4 541 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 DHX40Q8IX18 779 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 TEX11Q8IYF3 940 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 HACE1Q8IYU2 909 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 WDTC1Q8N5D0 677 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 TEX45Q8NA69 505 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 BEST2Q8NFU1 509 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 TMEM174Q8WUU8 243 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 ARHGEF26Q96DR7 871 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 MMABQ96EY8 250 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 CMTM3Q96MX0 182 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 SLITRK1Q96PX8 696 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 WDR77Q9BQA1 342 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 GLIS2Q9BZE0 524 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 LHPPQ9H008 270 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 MAGEE1Q9HCI5 957 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 PLK2Q9NYY3 685 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 ABI3Q9P2A4 366 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 CTNNAL1Q9UBT7 734 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 ADAM18Q9Y3Q7 739 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 HS3ST3B1Q9Y662 390 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 SESN1Q9Y6P5 492 aa3.85□□□□□ -1.79
SMCHD1-209ENST00000583441 AGAP14A8MT82 685 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 CHL1O00533 1208 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 TNFRSF13BO14836 293 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 TMCC2O75069 709 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 ETFAP13804 333 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 ZNF182P17025 639 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 TMEM11P17152 192 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 AGAP20933 346 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 GPTP24298 496 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 HOXA13P31271 388 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 ME1P48163 572 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 CLCN5P51795 746 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 RAD23BP54727 409 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 NLRP5P59047 1200 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 NUCB1Q02818 461 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 ARHGEF6Q15052 776 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 TOMM20Q15388 145 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 ADIPOQQ15848 244 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 DUSP6Q16828 381 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 ALG11Q2TAA5 492 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 ESCO2Q56NI9 601 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 MANEAQ5SRI9 462 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 PRAMEF19Q5SWL8 479 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 DAB2IPQ5VWQ8 1189 aa3.84□□□□□ -1.79
SMCHD1-209ENST00000583441 TMEM71Q6P5X7 295 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms