RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 SSTR2P30874 369 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 DDIT3P35638 169 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 COMPP49747 757 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 PEX5P50542 639 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 SEC61A1P61619 476 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 TMEM115Q12893 351 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 DDX10Q13206 875 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 KEAP1Q14145 624 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 DRAP1Q14919 205 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 EFNB3Q15768 340 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 TBCEQ15813 527 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 CCNG2Q16589 344 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 C2orf68Q2NKX9 166 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 ALG11Q2TAA5 492 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 SLC45A4Q5BKX6 768 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 PPP6R3Q5H9R7 873 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 ZNF324BQ6AW86 544 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 HIST2H2BCQ6DN03 193 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 HIST2H2BDQ6DRA6 164 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 HAPLN4Q86UW8 402 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 TEX19Q8NA77 164 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 TDRD7Q8NHU6 1098 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 CREB3L4Q8TEY5 395 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 UCMAQ8WVF2 138 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 PSPC1Q8WXF1 523 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 SMARCE1Q969G3 411 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 RTP4Q96DX8 246 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 MTBPQ96DY7 904 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 C7orf26Q96N11 449 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 KXD1Q9BQD3 176 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 NDST4Q9H3R1 872 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 ESRP2Q9H6T0 727 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 KIF9Q9HAQ2 790 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 CD93Q9NPY3 652 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 ASAH2Q9NR71 780 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 ERVK-11Q9UQG0 969 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 CEPT1Q9Y6K0 416 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 ATXN2Q99700 1313 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 IGLV5-37A0A075B6J1 123 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 C4orf47A7E2U8 309 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 TGFB3P10600 412 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 KRT10P13645 584 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 TNFAIP3P21580 790 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 EIF2S3P41091 472 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 RGS2P41220 211 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 PIP4K2AP48426 406 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 METAP2P50579 478 aaKnown RBP eCLIP4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 TUBA1BP68363 451 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 OLR1P78380 273 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 GRSF1Q12849 480 aaKnown RBP eCLIP4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 MYBPHQ13203 477 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 NFATC4Q14934 902 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 ASIC2Q16515 512 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 AMZ1Q400G9 498 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 FAM69BQ5VUD6 431 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 RUSC1-AS1Q66K80 236 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 FAAH2Q6GMR7 532 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 RHBDF2Q6PJF5 856 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 TSSK4Q6SA08 328 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 DLK2Q6UY11 383 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 QSOX2Q6ZRP7 698 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 WDR63Q8IWG1 891 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 ADHFE1Q8IWW8 467 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 DSELQ8IZU8 1212 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 INTS12Q96CB8 462 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 CSF3RQ99062 836 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 FAM110AQ9BQ89 295 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 IL25Q9H293 177 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 C6orf106Q9H6K1 298 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 HINT3Q9NQE9 182 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 CNGB3Q9NQW8 809 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 SMC4Q9NTJ3 1288 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 OLA1Q9NTK5 396 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 ORC3Q9UBD5 711 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 AASSQ9UDR5 926 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 SLCO3A1Q9UIG8 710 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 NFS1Q9Y697 457 aa4.61□□□□□ -1.67
SMCHD1-204ENST00000581226 CPED1A4D0V7 1026 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 NDUFS7O75251 213 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 GAGE7O76087 117 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 ZBTB11O95625 1053 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 CLEC3BP05452 202 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 GAGE12FP0CL80 117 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 GAGE12GP0CL81 117 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 GAGE12IP0CL82 117 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 IGHV4-30-4P0DP06 118 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 ITGB6P18564 788 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 BSGP35613 385 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 ART1P52961 327 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 RPS3AP61247 264 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 KIF5AQ12840 1032 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 GAGE1Q13065 139 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 GAGE4Q13068 117 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 OLIG2Q13516 323 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 FRG1Q14331 258 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 SLC39A14Q15043 492 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 USP41Q3LFD5 358 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 DPCR1Q3MIW9 517 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 C6orf141Q5SZD1 244 aa4.6□□□□□ -1.67
SMCHD1-204ENST00000581226 METTL2BQ6P1Q9 378 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms