RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 HSD11B1LQ7Z5J1 315 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 ZC3H18Q86VM9 953 aaKnown RBP20.18■□□□□ 0.82
SS18-218ENST00000581021 SLC25A45Q8N413 288 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 OXR1Q8N573 874 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 CCDC112Q8NEF3 446 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 RHBDD1Q8TEB9 315 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 TFB1MQ8WVM0 346 aaKnown RBP20.18■□□□□ 0.82
SS18-218ENST00000581021 P3H4Q92791 437 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 TADA1Q96BN2 335 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 SCRN2Q96FV2 425 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 IMP4Q96G21 291 aaKnown RBP20.18■□□□□ 0.82
SS18-218ENST00000581021 FAM118BQ9BPY3 351 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 OSBPL8Q9BZF1 889 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 WASF3Q9UPY6 502 aa20.18■□□□□ 0.82
SS18-218ENST00000581021 ARID1BQ8NFD5 2236 aaPredicted RBP20.18■□□□□ 0.82
SS18-218ENST00000581021 A0A1W2PQ67 120 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 K7ESM1 405 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 YKT6O15498 198 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 PCCBP05166 539 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 ITGAVP06756 1048 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 CES1P23141 567 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 HNF1BP35680 557 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 FOXK2Q01167 660 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 GLRX5Q86SX6 157 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 FAM174AQ8TBP5 190 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 TRIB3Q96RU7 358 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 RBM15Q96T37 977 aaKnown RBP eCLIP20.17■□□□□ 0.82
SS18-218ENST00000581021 C1QTNF7Q9BXJ2 289 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 TCEAL2Q9H3H9 227 aaPredicted RBP20.17■□□□□ 0.82
SS18-218ENST00000581021 DNAJC28Q9NX36 388 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 AMFRQ9UKV5 643 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 OR1A2Q9Y585 309 aa20.17■□□□□ 0.82
SS18-218ENST00000581021 A0A0J9YYE9 177 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 APOC4-APOC2K7ER74 178 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 NEBLO76041 1014 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 TRBC1P01850 177 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 APOC2P02655 101 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 GIMD1P0DJR0 217 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 NME1P15531 152 aaKnown RBP20.16■□□□□ 0.82
SS18-218ENST00000581021 ETV3P41162 512 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 INPP5AQ14642 412 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 SUZ12Q15022 739 aaKnown RBP20.16■□□□□ 0.82
SS18-218ENST00000581021 ACOX1Q15067 660 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 NOMO1Q15155 1222 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 TEX44Q53QW1 395 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 CRTC1Q6UUV9 634 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 SLCO6A1Q86UG4 719 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 PARGQ86W56 976 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 DCP2Q8IU60 420 aaKnown RBP20.16■□□□□ 0.82
SS18-218ENST00000581021 TXLNBQ8N3L3 684 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 EID2Q8N6I1 236 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 LPCAT1Q8NF37 534 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 SPATA22Q8NHS9 363 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 ACTL9Q8TC94 416 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 HES6Q96HZ4 224 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 TEKT5Q96M29 485 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 GLOD4Q9HC38 313 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 PCDH9Q9HC56 1237 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 GUCA1BQ9UMX6 200 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 EFR3BQ9Y2G0 817 aa20.16■□□□□ 0.82
SS18-218ENST00000581021 CAPN8A6NHC0 703 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 TRIM38O00635 465 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 PIAS2O75928 621 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 CSF2P04141 144 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 ATXN1LP0C7T5 689 aaKnown RBP20.15■□□□□ 0.82
SS18-218ENST00000581021 FTH1P19P0C7X4 201 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 DGKAP23743 735 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 OTUD4Q01804 1114 aaKnown RBP20.15■□□□□ 0.82
SS18-218ENST00000581021 CDKN3Q16667 212 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 QPCTQ16769 361 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 LRRC66Q68CR7 880 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 DENND2CQ68D51 928 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 USP45Q70EL2 814 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 SYCE1Q8N0S2 351 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 RBFAQ8N0V3 343 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 RNF10Q8N5U6 811 aaKnown RBP20.15■□□□□ 0.82
SS18-218ENST00000581021 PNPLA1Q8N8W4 532 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 DTD2Q96FN9 168 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 IFT43Q96FT9 208 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 SLC25A51Q9H1U9 297 aa20.15■□□□□ 0.82
SS18-218ENST00000581021 COL5A1P20908 1838 aaPredicted RBP20.15■□□□□ 0.82
SS18-218ENST00000581021 CHD8Q9HCK8 2581 aa20.14■□□□□ 0.82
SS18-218ENST00000581021 TCRBV7S2A1N4TA0A589 114 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 GOLGA6L3A6NEY3 463 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 F5H423 210 aaPredicted RBP20.14■□□□□ 0.81
SS18-218ENST00000581021 MT-CYBP00156 380 aaPredicted RBP20.14■□□□□ 0.81
SS18-218ENST00000581021 C1SP09871 688 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 CYP2A6P11509 494 aaPredicted RBP20.14■□□□□ 0.81
SS18-218ENST00000581021 YPEL5P62699 121 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 MTM1Q13496 603 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 GALNT3Q14435 633 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 MACC1Q6ZN28 852 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 Q6ZVL8 140 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 BZW1Q7L1Q6 419 aaKnown RBP20.14■□□□□ 0.81
SS18-218ENST00000581021 ZNF567Q8N184 647 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 APOOQ9BUR5 198 aa20.14■□□□□ 0.81
SS18-218ENST00000581021 MIF4GDA9UHW6 222 aaKnown RBP20.13■□□□□ 0.81
SS18-218ENST00000581021 DKK1O94907 266 aa20.13■□□□□ 0.81
SS18-218ENST00000581021 NFKB1P19838 968 aa20.13■□□□□ 0.81
SS18-218ENST00000581021 SPINK2P20155 84 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms