RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 ASLP04424 464 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ITGA2BP08514 1039 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SNRPAP09012 282 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ALADP13716 330 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 HNRNPLP14866 589 aaKnown RBP eCLIP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 BRAFP15056 766 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CHN1P15882 459 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 BPIP17213 487 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 COL9A1P20849 921 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SAT1P21673 171 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CD72P21854 359 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SERPINA4P29622 427 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FOXN2P32314 431 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CTHP32929 405 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TIE1P35590 1138 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GP5P40197 560 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CCNFP41002 786 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PSMD8P48556 350 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NEK3P51956 506 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LIMK2P53671 638 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 WDR4P57081 412 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GNGT1P63211 74 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 IRX4P78413 519 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 XIAPP98170 497 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ACVR1Q04771 509 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SULT2A1Q06520 285 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PEX6Q13608 980 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 THOC5Q13769 683 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FRG1Q14331 258 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TAF1AQ15573 450 aaPredicted RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 HNRNPA1L2Q32P51 320 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 C2orf27AQ580R0 203 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PRPF38BQ5VTL8 546 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FAM219BQ5XKK7 198 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PDPK2PQ6A1A2 396 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FSTL4Q6MZW2 842 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PSAPL1Q6NUJ1 521 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KIAA1211LQ6NV74 962 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 C16orf46Q6P387 395 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ZNF549Q6P9A3 640 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FAM151BQ6UXP7 276 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GDPD4Q6W3E5 623 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MTSS1LQ765P7 747 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PIM3Q86V86 326 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ZC3HC1Q86WB0 502 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CCNJLQ8IV13 435 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SPATA6LQ8N4H0 392 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SLC44A3Q8N4M1 653 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 DEFB123Q8N688 67 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KIAA1958Q8N8K9 716 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 C2CD4AQ8NCU7 369 aaPredicted RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 BRSK1Q8TDC3 778 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PTCD2Q8WV60 388 aaKnown RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ECHDC3Q96DC8 303 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 VPS39Q96JC1 886 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PKNOX2Q96KN3 472 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NECTIN4Q96NY8 510 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FAM129BQ96TA1 746 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 RBBP8Q99708 897 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 OLFM1Q99784 485 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NAT9Q9BTE0 207 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GPR63Q9BZJ6 419 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MFSD1Q9H3U5 465 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KCNK12Q9HB15 430 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PCDH12Q9NPG4 1184 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PRSS16Q9NQE7 514 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NLE1Q9NVX2 485 aaPredicted RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ZNF358Q9NW07 568 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 THAP10Q9P2Z0 257 aaPredicted RBP6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CD84Q9UIB8 345 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FBXO5Q9UKT4 447 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 COQ6Q9Y2Z9 468 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PIAS3Q9Y6X2 628 aa6.16□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GBF1Q92538 1859 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 C1orf232A0A0U1RR37 186 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FAM95CA0A1B0GW59 222 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TSPAN11A1L157 253 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MAGEB16A2A368 324 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 C16orf96A6NNT2 1141 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 UPK3BL1B0FP48 263 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 UPK3BL2E5RIL1 263 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KPNA3O00505 521 aaPredicted RBP6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 STX7O15400 261 aaKnown RBP6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TYROBPO43914 113 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 OR1I1O60431 355 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SOCS5O75159 536 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PAPSS2O95340 614 aaPredicted RBP6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 S1PR4O95977 384 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 APODP05090 189 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ATP5BP06576 529 aaKnown RBP6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 EPHX1P07099 455 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SRPRAP08240 638 aaKnown RBP6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GM2AP17900 193 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KRT4P19013 534 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 UGT1A6P19224 532 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LPOP22079 712 aaPredicted RBP6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 UGT1A1P22309 533 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 UGT1A4P22310 534 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CES1P23141 567 aa6.15□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MC4RP32245 332 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms