RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SLC10A7Q0GE19 358 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 PEX6Q13608 980 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 ZNF235Q14590 738 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 CDKN3Q16667 212 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 LRRC73Q5JTD7 316 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 ALKBH5Q6P6C2 394 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 CLEC14AQ86T13 490 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 VSIG1Q86XK7 387 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 GPR156Q8NFN8 814 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 OR56A4Q8NGH8 313 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 NSMCE1Q8WV22 266 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 TMEM159Q96B96 161 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 SCRN2Q96FV2 425 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 SLC46A1Q96NT5 459 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 TSGA13Q96PP4 275 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 B3GNT4Q9C0J1 378 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 TCEAL2Q9H3H9 227 aaPredicted RBP14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 CBX8Q9HC52 389 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 UVRAGQ9P2Y5 699 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 KLQ9UEF7 1012 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 ACSL6Q9UKU0 697 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 DNPEPQ9ULA0 475 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 NENFQ9UMX5 172 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 LUC7L2Q9Y383 392 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 PCDHB1Q9Y5F3 818 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 ENTPD2Q9Y5L3 495 aa14.55□□□□□ -0.08
SMARCE1-216ENST00000580419 CPED1A4D0V7 1026 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 CDRT15L2A8MXV6 281 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 ZNF487B1APH4 448 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 MUSKO15146 869 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 SKILP12757 684 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 GM2AP17900 193 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 IL4RP24394 825 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 GABREP78334 506 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 HADHQ16836 314 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 TDRD12Q587J7 1177 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 MARC1Q5VT66 337 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 PNCKQ6P2M8 343 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 ENPP7Q6UWV6 458 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 WDR36Q8NI36 951 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 FUBP1Q96AE4 644 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 ZNF670Q9BS34 389 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 TEX101Q9BY14 249 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 PCDH18Q9HCL0 1135 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 DOLKQ9UPQ8 538 aa14.54□□□□□ -0.08
SMARCE1-216ENST00000580419 ZFC3H1O60293 1989 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 SCN8AQ9UQD0 1980 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 A0A087X0T9 212 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 CCDC187A0A096LP49 1063 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 CAPN8A6NHC0 703 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 HEXIM1O94992 359 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 PYGLP06737 847 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 TPM3P06753 285 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 FAM228BP0C875 321 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 CYP2A6P11509 494 aaPredicted RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 MYCLP1P12525 358 aaPredicted RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 GLB1P16278 677 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 CCKBRP32239 447 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 VIPR1P32241 457 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 MAN1A1P33908 653 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 ARSEP51690 589 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 RPL26P61254 145 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 SPIDRQ14159 915 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 PAFAH1B3Q15102 231 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 PDK2Q15119 407 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 TIGD7Q6NT04 549 aaPredicted RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 ARHGAP36Q6ZRI8 547 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 C17orf82Q86X59 251 aaPredicted RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 HID1Q8IV36 788 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 SPACA3Q8IXA5 215 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 NDUFAF2Q8N183 169 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 ARL14Q8N4G2 192 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 ATPAF2Q8N5M1 289 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 NETO2Q8NC67 525 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 MAML1Q92585 1016 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 PRR11Q96HE9 360 aaPredicted RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 CCDC3Q9BQI4 270 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 THAP2Q9H0W7 228 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 WDR26Q9H7D7 661 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 TRNAU1APQ9NX07 287 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 MYO1AQ9UBC5 1043 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 ANAPC7Q9UJX3 599 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 RPL26L1Q9UNX3 145 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 COQ6Q9Y2Z9 468 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 PCDHGA7Q9Y5G6 932 aa14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.53□□□□□ -0.082e-7■■■■□ 19.8
SMARCE1-216ENST00000580419 GCN1Q92616 2671 aaKnown RBP14.53□□□□□ -0.08
SMARCE1-216ENST00000580419 GOLGA6L19H0YKK7 550 aa14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 ATXN7O15265 892 aaPredicted RBP14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 NUDT21O43809 227 aaKnown RBP14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 FZD6O60353 706 aa14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 PGLSO95336 258 aa14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 GYPCP04921 128 aa14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 MPOP05164 745 aa14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 ITGA2BP08514 1039 aa14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 ZNF30P17039 623 aa14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 AMPD1P23109 780 aa14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 ITPKBP27987 946 aa14.52□□□□□ -0.09
SMARCE1-216ENST00000580419 RBMS1P29558 406 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms