RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SEL1L3Q68CR1 1132 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 KDM7AQ6ZMT4 941 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 LEKR1Q6ZMV7 388 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 NOP9Q86U38 636 aaKnown RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 FAM131BQ86XD5 332 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 XYLT1Q86Y38 959 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 DRC7Q8IY82 874 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 GALNT15Q8N3T1 639 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 EMC1Q8N766 993 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 MLKLQ8NB16 471 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 ATP11CQ8NB49 1132 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 TMEM35BQ8NCS4 154 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 ZNF397Q8NF99 534 aaPredicted RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 OR2A12Q8NGT7 310 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 SLC20A1Q8WUM9 679 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 CPA5Q8WXQ8 436 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 PPP1R14AQ96A00 147 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 SKA1Q96BD8 255 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 C18orf8Q96DM3 657 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 TCTN2Q96GX1 697 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 FAM81BQ96LP2 452 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 CFAP57Q96MR6 1250 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 BBC3Q96PG8 261 aaPredicted RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 NOX5Q96PH1 765 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 TUBGCP2Q9BSJ2 902 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 NAA15Q9BXJ9 866 aaKnown RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 HDAC8Q9BY41 377 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 KLHL25Q9H0H3 589 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 NDST4Q9H3R1 872 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 CLSTN2Q9H4D0 955 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 NOL6Q9H6R4 1146 aaKnown RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 SAMSN1Q9NSI8 373 aaKnown RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 UCKL1Q9NWZ5 548 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 TAB2Q9NYJ8 693 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 DUSP13Q9UII6 198 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 ZFR2Q9UPR6 939 aaKnown RBP6.35□□□□□ -1.39
NUP88-212ENST00000576708 PKD1L2Q7Z442 2459 aa6.35□□□□□ -1.39
NUP88-212ENST00000576708 E9PAM4 449 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 PRAMEF26H0Y7S4 382 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 EPHB6O15197 1021 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 ALOX15BO15296 676 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 FFAR2O15552 330 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 SLC7A4O43246 635 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 TLX3O43711 291 aaPredicted RBP6.34□□□□□ -1.39
NUP88-212ENST00000576708 ZNF821O75541 412 aaPredicted RBP6.34□□□□□ -1.39
NUP88-212ENST00000576708 RFPL3O75679 317 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 ZMPSTE24O75844 475 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 JUPP14923 745 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 ITPKBP27987 946 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 GKP32189 559 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 CDH5P33151 784 aaPredicted RBP6.34□□□□□ -1.39
NUP88-212ENST00000576708 ACVRL1P37023 503 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 GABRB2P47870 512 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 RXRGP48443 463 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 ARRB1P49407 418 aaPredicted RBP6.34□□□□□ -1.39
NUP88-212ENST00000576708 DNA2P51530 1060 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 KRT83P78385 493 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 ARF5P84085 180 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 SEMG2Q02383 582 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 EGR3Q06889 387 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 TARDBPQ13148 414 aaKnown RBP eCLIP6.34□□□□□ -1.39
NUP88-212ENST00000576708 FGL2Q14314 439 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 TCEAL1Q15170 157 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 C15orf59Q2T9L4 293 aaPredicted RBP6.34□□□□□ -1.39
NUP88-212ENST00000576708 ZNF284Q2VY69 593 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 INAVAQ3KP66 663 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 SLC25A52Q3SY17 297 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 SLC45A4Q5BKX6 768 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 BRMS1LQ5PSV4 323 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 HES3Q5TGS1 186 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 SFMBT2Q5VUG0 894 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 NAA35Q5VZE5 725 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 C22orf39Q6P5X5 142 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 CRTC3Q6UUV7 619 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 LRRC31Q6UY01 552 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 DPY19L3Q6ZPD9 716 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 DSG4Q86SJ6 1040 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 TMPRSS12Q86WS5 348 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 TRIM69Q86WT6 500 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 ERICH1Q86X53 443 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 SLC25A45Q8N413 288 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 NETO2Q8NC67 525 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 OR6K2Q8NGY2 324 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 SLC30A5Q8TAD4 765 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 NT5C3BQ969T7 300 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 LGR4Q9BXB1 951 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 CALN1Q9BXU9 219 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 ERVMER34-1Q9H9K5 563 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 ZNF212Q9UDV6 495 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 TMEM59LQ9UK28 342 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 STAP1Q9ULZ2 295 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 HS3ST2Q9Y278 367 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 PCDHGA1Q9Y5H4 931 aa6.34□□□□□ -1.39
NUP88-212ENST00000576708 DOCK9Q9BZ29 2069 aa6.34□□□□□ -1.4
NUP88-212ENST00000576708 KNL1Q8NG31 2342 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 NBEAQ8NFP9 2946 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 DSPP15924 2871 aaKnown RBP6.33□□□□□ -1.4
NUP88-212ENST00000576708 IGLV3-10A0A075B6K4 115 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 F8VZ95 297 aa6.33□□□□□ -1.4
NUP88-212ENST00000576708 FAM72CH0Y354 149 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms