RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 BAHD1Q8TBE0 780 aaPredicted RBP15.3■□□□□ 0.04
SMG6-220ENST00000576218 LMX1AQ8TE12 382 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 NSMCE3Q96MG7 304 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 SCNM1Q9BWG6 230 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 HEMGNQ9BXL5 484 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 TDRD1Q9BXT4 1180 aaKnown RBP15.3■□□□□ 0.04
SMG6-220ENST00000576218 ADGRE3Q9BY15 652 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 TSGA10Q9BZW7 698 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 LACRTQ9GZZ8 138 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 PCDH9Q9HC56 1237 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 EVA1BQ9NVM1 165 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 KCTD5Q9NXV2 234 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 SAE1Q9UBE0 346 aaPredicted RBP15.3■□□□□ 0.04
SMG6-220ENST00000576218 SPASTQ9UBP0 616 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 KLQ9UEF7 1012 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 MOSPD1Q9UJG1 213 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 SALL4Q9UJQ4 1053 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 DNPEPQ9ULA0 475 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 OR1A2Q9Y585 309 aa15.3■□□□□ 0.04
SMG6-220ENST00000576218 NPIPB15A6NHN6 443 aaPredicted RBP15.29■□□□□ 0.04
SMG6-220ENST00000576218 H7C0C1 242 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 PJA2O43164 708 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 MTSS1O43312 755 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 HEXIM1O94992 359 aaKnown RBP15.29■□□□□ 0.04
SMG6-220ENST00000576218 CSF2P04141 144 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 ALPIP09923 528 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 CTSEP14091 401 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 PECAM1P16284 738 aaPredicted RBP15.29■□□□□ 0.04
SMG6-220ENST00000576218 KELP23276 732 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 ATP5OP48047 213 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 BLKP51451 505 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 COPS2P61201 443 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 NFATC4Q14934 902 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 CNGA3Q16281 694 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 PPP2R5EQ16537 467 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 PCSK7Q16549 785 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 ALG1LQ6GMV1 187 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 CCDC70Q6NSX1 233 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 ENPP7Q6UWV6 458 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 NT5DC3Q86UY8 548 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 TMEM139Q8IV31 216 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 HID1Q8IV36 788 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 PHACTR4Q8IZ21 702 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 CCDC112Q8NEF3 446 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 ZNF548Q8NEK5 533 aaPredicted RBP15.29■□□□□ 0.04
SMG6-220ENST00000576218 SCRN2Q96FV2 425 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 OLFM3Q96PB7 478 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 IL12RB2Q99665 862 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 APOOQ9BUR5 198 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 DUSP23Q9BVJ7 150 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 WDR26Q9H7D7 661 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 UCKL1Q9NWZ5 548 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 KLHL8Q9P2G9 620 aaPredicted RBP15.29■□□□□ 0.04
SMG6-220ENST00000576218 PCNX2A6NKB5 2137 aa15.29■□□□□ 0.04
SMG6-220ENST00000576218 GRID2IPA4D2P6 1211 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 AQP9O43315 295 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 RFPL3O75679 317 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 PDHA1P08559 390 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 ETV3P41162 512 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 PEX5P50542 639 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 SHC2P98077 582 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 NIPAL4Q0D2K0 466 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 DNAJC3Q13217 504 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 AGERQ15109 404 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 TCEA2Q15560 299 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 PRRT3Q5FWE3 981 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 LRRC66Q68CR7 880 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 RAET1GQ6H3X3 334 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 KDELC2Q7Z4H8 507 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 RBFAQ8N0V3 343 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 ARRDC2Q8TBH0 407 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 PIH1D2Q8WWB5 315 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 SPOCK2Q92563 424 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 WDR92Q96MX6 357 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 RBM15Q96T37 977 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMG6-220ENST00000576218 GPR27Q9NS67 375 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 NLGN3Q9NZ94 848 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 TRIM10Q9UDY6 481 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 PCDHA3Q9Y5H8 950 aa15.28■□□□□ 0.04
SMG6-220ENST00000576218 A0A0J9YYE9 177 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 GOLGA6L9A6NEM1 432 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 CAPN8A6NHC0 703 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 APOC4-APOC2K7ER74 178 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 PSMD11O00231 422 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 PDE2AO00408 941 aaPredicted RBP15.27■□□□□ 0.04
SMG6-220ENST00000576218 SIGLEC6O43699 453 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 KRT86O43790 486 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 STK10O94804 968 aaKnown RBP15.27■□□□□ 0.04
SMG6-220ENST00000576218 RASGRP1O95267 797 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 TOP3BO95985 862 aaKnown RBP15.27■□□□□ 0.04
SMG6-220ENST00000576218 TRBC1P01850 177 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 APOC2P02655 101 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 ANXA6P08133 673 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 ZNF30P17039 623 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 HNF1BP35680 557 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 RPL26P61254 145 aaKnown RBP15.27■□□□□ 0.04
SMG6-220ENST00000576218 EIF2B5Q13144 721 aaKnown RBP15.27■□□□□ 0.04
SMG6-220ENST00000576218 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.04
SMG6-220ENST00000576218 TPRG1LQ5T0D9 272 aa15.27■□□□□ 0.04
SMG6-220ENST00000576218 BBS12Q6ZW61 710 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms