RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ENGP17813 658 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 HNF1BP35680 557 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 CSNK1DP48730 415 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 NR2C2P49116 596 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 LIG3P49916 1009 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 RENBPP51606 427 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 FAM193AP78312 1265 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 MRPS25P82663 173 aaKnown RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 NSUN2Q08J23 767 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 BYSLQ13895 437 aaKnown RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 PTPRCAPQ14761 206 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 IRF4Q15306 451 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 OASLQ15646 514 aaKnown RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 QPCTQ16769 361 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 TEX44Q53QW1 395 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 CFAP58Q5T655 872 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 C8orf74Q6P047 294 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 KDELC1Q6UW63 502 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 PRR23CQ6ZRP0 262 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 HSD11B1LQ7Z5J1 315 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 TRIM69Q86WT6 500 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 HORMAD1Q86X24 394 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 SPATS2Q86XZ4 545 aaKnown RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 SYT12Q8IV01 421 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 CDKL3Q8IVW4 592 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 SLC25A41Q8N5S1 370 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 PAF1Q8N7H5 531 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 PRELID2Q8N945 189 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 C12orf50Q8NA57 414 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 PLA2G15Q8NCC3 412 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 IPMKQ8NFU5 416 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 CADM4Q8NFZ8 388 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 OR13H1Q8NG92 308 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 DNASE2BQ8WZ79 361 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 SLCO2A1Q92959 643 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 FATE1Q969F0 183 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 SERAC1Q96JX3 654 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 MRGPRX2Q96LB1 330 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 TUBGCP5Q96RT8 1024 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 TRIB3Q96RU7 358 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 KLF6Q99612 283 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 GTPBP2Q9BX10 602 aaKnown RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 IRF2BPLQ9H1B7 796 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 GBA3Q9H227 469 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 PCDH9Q9HC56 1237 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 CAPN10Q9HC96 672 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 PREBQ9HCU5 417 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 AASDHPPTQ9NRN7 309 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 RSPH14Q9UHP6 348 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 SCML1Q9UN30 329 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 ARIH1Q9Y4X5 557 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-215ENST00000576033 SNX11Q9Y5W9 270 aa7.94□□□□□ -1.14
CCDC40-215ENST00000576033 TDRD6O60522 2096 aaKnown RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 A0A1W2PR77 199 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 BCAT2O15382 392 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 BUD23O43709 281 aaKnown RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 AP1G1O43747 822 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 RRP9O43818 475 aaKnown RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 SOCS5O75159 536 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 ERLIN1O75477 346 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 SEC31AO94979 1220 aaKnown RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 AGTP01019 485 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 XPAP23025 273 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 CD27P26842 260 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 ECHS1P30084 290 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 CA5AP35218 305 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 HSPA9P38646 679 aaKnown RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 ETV3P41162 512 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 CCR5P51681 352 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 RAD51Q06609 339 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 MTM1Q13496 603 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 TRIP13Q15645 432 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 KIF19Q2TAC6 998 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 AASDHQ4L235 1098 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 ZNF542PQ5EBM4 170 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 ANKRD20A2Q5SQ80 823 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 ARMC12Q5T9G4 340 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 ANKRD20A1Q5TYW2 823 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 ANKRD20A3Q5VUR7 823 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 LRRC66Q68CR7 880 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 CCDC70Q6NSX1 233 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 CRTC1Q6UUV9 634 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 DPPA4Q7L190 304 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 PID1Q7Z2X4 250 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 LYSMD3Q7Z3D4 306 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 PTAR1Q7Z6K3 402 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 LRRC49Q8IUZ0 686 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 BBS5Q8N3I7 341 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 TP53I13Q8NBR0 393 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 TMEM145Q8NBT3 493 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 CXorf40AQ8TE69 158 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 PTCD2Q8WV60 388 aaKnown RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 FOXJ1Q92949 421 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 EID2BQ96D98 161 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 LRIG1Q96JA1 1093 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 ZNF641Q96N77 438 aaPredicted RBP7.93□□□□□ -1.14
CCDC40-215ENST00000576033 SPATA13Q96N96 652 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 KRT12Q99456 494 aa7.93□□□□□ -1.14
CCDC40-215ENST00000576033 AGAP2Q99490 1192 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms