RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CD97P48960 835 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 GPLD1P80108 840 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 CRTC2Q53ET0 693 aaPredicted RBP9.03□□□□□ -0.96
SMG6-218ENST00000575454 LACTB2Q53H82 288 aaPredicted RBP9.03□□□□□ -0.96
SMG6-218ENST00000575454 PNCKQ6P2M8 343 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 STRADAQ7RTN6 431 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 NLGN4XQ8N0W4 816 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 RTL3Q8N8U3 475 aaKnown RBP9.03□□□□□ -0.96
SMG6-218ENST00000575454 RCBTB1Q8NDN9 531 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 NLGN4YQ8NFZ3 816 aaPredicted RBP9.03□□□□□ -0.96
SMG6-218ENST00000575454 ART4Q93070 314 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 NTAN1Q96AB6 310 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 ABHD17AQ96GS6 310 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 NUDT22Q9BRQ3 303 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 CATSPERBQ9H7T0 1116 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 ZNF71Q9NQZ8 489 aaPredicted RBP9.03□□□□□ -0.96
SMG6-218ENST00000575454 RWDD2AQ9UIY3 292 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 MOSPD1Q9UJG1 213 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 PILRAQ9UKJ1 303 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 B3GALT1Q9Y5Z6 326 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 MYLKQ15746 1914 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 PRSS38A1L453 326 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 RASA4BC9J798 803 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 FAM72CH0Y354 149 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 INSIG1O15503 277 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 NKX2-8O15522 239 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 RASA4O43374 803 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 PIGNO95427 931 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 ECEL1O95672 775 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 FGF1P05230 155 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 THRAP10827 490 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 NFKBIAP25963 317 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 ERCC5P28715 1186 aaPredicted RBP9.02□□□□□ -0.97
SMG6-218ENST00000575454 PTPN9P43378 593 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 APBA1Q02410 837 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 ABHD18Q0P651 414 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 CYTH1Q15438 398 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 CDO1Q16878 200 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 CCDC14Q49A88 953 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 FAM72AQ5TYM5 149 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 AFMIDQ63HM1 303 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 FAM72DQ6L9T8 149 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 TMEM71Q6P5X7 295 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 FAM72BQ86X60 149 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 FAM129CQ86XR2 697 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 NRSN1Q8IZ57 195 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 PAF1Q8N7H5 531 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 TEX19Q8NA77 164 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 PLA2G15Q8NCC3 412 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 RXFP2Q8WXD0 754 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 MIB2Q96AX9 1013 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 CARS2Q9HA77 564 aaKnown RBP9.02□□□□□ -0.97
SMG6-218ENST00000575454 MRPL40Q9NQ50 206 aaKnown RBP9.02□□□□□ -0.97
SMG6-218ENST00000575454 PHPT1Q9NRX4 125 aaPredicted RBP9.02□□□□□ -0.97
SMG6-218ENST00000575454 SPATS2LQ9NUQ6 558 aaKnown RBP9.02□□□□□ -0.97
SMG6-218ENST00000575454 TAAR2Q9P1P5 351 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 UBA2Q9UBT2 640 aaPredicted RBP9.02□□□□□ -0.97
SMG6-218ENST00000575454 PLAAQ9Y263 795 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 KCTD3Q9Y597 815 aa9.02□□□□□ -0.97
SMG6-218ENST00000575454 A0A1W2PQ67 120 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 PRR19A6NJB7 356 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 EFCAB7A8K855 629 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 WASH4PA8MWX3 477 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 MKRN2OSH3BPM6 223 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 BIN1O00499 593 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 FGF10O15520 208 aaPredicted RBP9.01□□□□□ -0.97
SMG6-218ENST00000575454 VPS4BO75351 444 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 PRKAR1AP10644 381 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 MYCLP1P12525 358 aaPredicted RBP9.01□□□□□ -0.97
SMG6-218ENST00000575454 TCN2P20062 427 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 HTR7P34969 479 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 MTIF2P46199 727 aaKnown RBP9.01□□□□□ -0.97
SMG6-218ENST00000575454 ARSDP51689 593 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 AIF1P55008 147 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 MAZP56270 477 aaKnown RBP9.01□□□□□ -0.97
SMG6-218ENST00000575454 BCL2L1Q07817 233 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 CDC20Q12834 499 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 DEFB109BQ30KR1 87 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 TAF3Q5VWG9 929 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 KCTD16Q68DU8 428 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 TRNP1Q6NT89 227 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 CEACAM20Q6UY09 585 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 LIPIQ6XZB0 460 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 DPPA4Q7L190 304 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 KDELC2Q7Z4H8 507 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 SLFN11Q7Z7L1 901 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 ZNF677Q86XU0 584 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 CAMK1DQ8IU85 385 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 SFTPA2Q8IWL1 248 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 UMODL1-AS1Q8N2C9 162 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 EMC1Q8N766 993 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 CCL4L1Q8NHW4 92 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 CPA5Q8WXQ8 436 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 CENPIQ92674 756 aaPredicted RBP9.01□□□□□ -0.97
SMG6-218ENST00000575454 AHCYL2Q96HN2 611 aaKnown RBP9.01□□□□□ -0.97
SMG6-218ENST00000575454 EXOC2Q96KP1 924 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 ZMYND15Q9H091 742 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 SIX2Q9NPC8 291 aa9.01□□□□□ -0.97
SMG6-218ENST00000575454 METTL5Q9NRN9 209 aaKnown RBP9.01□□□□□ -0.97
SMG6-218ENST00000575454 KCNK4Q9NYG8 393 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms