RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 HOXC4P09017 264 aaPredicted RBP22.06■■□□□ 1.12
SNF8-216ENST00000573795 ELFN1P0C7U0 828 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 GLB1P16278 677 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 BCL2L1Q07817 233 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 NSUN2Q08J23 767 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNF8-216ENST00000573795 HLTFQ14527 1009 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNF8-216ENST00000573795 ERMARDQ5T6L9 678 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 SPRED1Q7Z699 444 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 TAF8Q7Z7C8 310 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 Q8N9G6 341 aaPredicted RBP22.06■■□□□ 1.12
SNF8-216ENST00000573795 TMEM74Q96NL1 305 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 EIF3CQ99613 913 aaKnown RBP22.06■■□□□ 1.12
SNF8-216ENST00000573795 CINPQ9BW66 212 aaPredicted RBP22.06■■□□□ 1.12
SNF8-216ENST00000573795 STRADBQ9C0K7 418 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.06■■□□□ 1.12
SNF8-216ENST00000573795 LOXL2Q9Y4K0 774 aa22.06■■□□□ 1.12
SNF8-216ENST00000573795 TMCO5BA8MYB1 307 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 TNFRSF10CO14798 259 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 ITIH1P19827 911 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 IL10RBQ08334 325 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 C14orf28Q4W4Y0 310 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 JAMLQ86YT9 394 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 FAM46DQ8NEK8 389 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 ANKRD20A12PQ8NF67 263 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 SP110Q9HB58 689 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 PARVAQ9NVD7 372 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 PISDQ9UG56 409 aa22.05■■□□□ 1.12
SNF8-216ENST00000573795 TTC24A2A3L6 582 aaPredicted RBP22.04■■□□□ 1.12
SNF8-216ENST00000573795 TMEM191CA6NGB0 347 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 A8MX80 341 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 B4DGG1 531 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 DFFAO00273 331 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 ATP1A3P13637 1013 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 PNLIPP16233 465 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 MIPP30301 263 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 ETV5P41161 510 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 DPYSQ14117 519 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 RFTN1Q14699 578 aaPredicted RBP22.04■■□□□ 1.12
SNF8-216ENST00000573795 SPECC1LQ69YQ0 1117 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 SLITRK4Q8IW52 837 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 EXD3Q8N9H8 876 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 SPOCK2Q92563 424 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 COQ10AQ96MF6 247 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 PSKH2Q96QS6 385 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 CYP4F12Q9HCS2 524 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 ANO10Q9NW15 660 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 B4GALT6Q9UBX8 382 aa22.04■■□□□ 1.12
SNF8-216ENST00000573795 AGRPO00253 132 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 NVLO15381 856 aaKnown RBP22.03■■□□□ 1.12
SNF8-216ENST00000573795 TEX33O43247 280 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 PEX11BO96011 259 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 DESP17661 470 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 TNFAIP3P21580 790 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 SCNN1BP51168 640 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 AP1S1P61966 158 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 SLC10A7Q0GE19 358 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 LINC00303Q3SY05 128 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 PPP6R3Q5H9R7 873 aaPredicted RBP22.03■■□□□ 1.12
SNF8-216ENST00000573795 PNCKQ6P2M8 343 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 NRROSQ86YC3 692 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 WDR26Q9H7D7 661 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 CWC15Q9P013 229 aaKnown RBP22.03■■□□□ 1.12
SNF8-216ENST00000573795 LRIT1Q9P2V4 623 aa22.03■■□□□ 1.12
SNF8-216ENST00000573795 PRSS38A1L453 326 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 PYCARD-AS1I3L0S3 204 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 DAPK3O43293 454 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 HTRA2O43464 458 aaPredicted RBP22.02■■□□□ 1.12
SNF8-216ENST00000573795 LRCH4O75427 683 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 FUCA1P04066 466 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 JMJD7P0C870 316 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 LIPCP11150 499 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 CR2P20023 1033 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 KELP23276 732 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 POLR2LP62875 67 aaKnown RBP22.02■■□□□ 1.12
SNF8-216ENST00000573795 B4GALNT1Q00973 533 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 LBRQ14739 615 aaKnown RBP22.02■■□□□ 1.12
SNF8-216ENST00000573795 CNGA3Q16281 694 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 STX1AQ16623 288 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 E4F1Q66K89 784 aaPredicted RBP22.02■■□□□ 1.12
SNF8-216ENST00000573795 C17orf82Q86X59 251 aaPredicted RBP22.02■■□□□ 1.12
SNF8-216ENST00000573795 FNIP1Q8TF40 1166 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 SPATS2LQ9NUQ6 558 aaKnown RBP22.02■■□□□ 1.12
SNF8-216ENST00000573795 FOXJ2Q9P0K8 574 aa22.02■■□□□ 1.12
SNF8-216ENST00000573795 PRAMEF33A0A0G2JMD5 474 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 NUDT21O43809 227 aaKnown RBP22.01■■□□□ 1.11
SNF8-216ENST00000573795 PRAMEF10O60809 474 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 CCDC172P0C7W6 258 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 CDK11BP21127 795 aaKnown RBP22.01■■□□□ 1.11
SNF8-216ENST00000573795 HCAR3P49019 387 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 MAZP56270 477 aaKnown RBP22.01■■□□□ 1.11
SNF8-216ENST00000573795 ACOX1Q15067 660 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 TMCO4Q5TGY1 634 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 SASS6Q6UVJ0 657 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 PSTKQ8IV42 348 aaKnown RBP22.01■■□□□ 1.11
SNF8-216ENST00000573795 CBARPQ8N350 705 aaPredicted RBP22.01■■□□□ 1.11
SNF8-216ENST00000573795 PGBD5Q8N414 524 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 GPBAR1Q8TDU6 330 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 PTCD2Q8WV60 388 aaKnown RBP22.01■■□□□ 1.11
SNF8-216ENST00000573795 SEMA6CQ9H3T2 930 aa22.01■■□□□ 1.11
SNF8-216ENST00000573795 DPEP2Q9H4A9 486 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms