RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 EFHBQ8N7U6 833 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 PIH1D2Q8WWB5 315 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 TSPAN17Q96FV3 270 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 TUBGCP5Q96RT8 1024 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 CAMSAP3Q9P1Y5 1249 aaPredicted RBP29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 MARCH4Q9P2E8 410 aaPredicted RBP29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 MID2Q9UJV3 735 aa29.18■■■□□ 2.26
CTDNEP1-208ENST00000573600 APOA4P06727 396 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 SERPINA4P29622 427 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 STK19P49842 368 aaPredicted RBP29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 IRX4P78413 519 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 IRF9Q00978 393 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 IFT88Q13099 833 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 DHCR24Q15392 516 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 FASTKD1Q53R41 847 aaKnown RBP29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 MFSD6LQ8IWD5 586 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 RYBPQ8N488 228 aaPredicted RBP29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 MRPL38Q96DV4 380 aaKnown RBP29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 OMDQ99983 421 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 TNKS2Q9H2K2 1166 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 A0A087X1B8 175 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 EPOPA6NHQ4 379 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 KIAA0754O94854 1291 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 SLC35E2BP0CK96 405 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 HOXB8P17481 243 aaPredicted RBP29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 CHI3L2Q15782 390 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 ZNF789Q5FWF6 425 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 RARS2Q5T160 578 aaKnown RBP29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 CCDC91Q7Z6B0 441 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 NPAS3Q8IXF0 933 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 TTC30BQ8N4P2 665 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 OR6K2Q8NGY2 324 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 ABHD8Q96I13 439 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 KLHL14Q9P2G3 628 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 FBXO10Q9UK96 956 aa29.17■■■□□ 2.26
CTDNEP1-208ENST00000573600 STX7O15400 261 aaKnown RBP29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 PHGDHO43175 533 aaKnown RBP29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 TROVE2P10155 538 aaKnown RBP eCLIP29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 ADIPOR2Q86V24 386 aa29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 LRRC3BQ96PB8 259 aa29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 C1QTNF1Q9BXJ1 281 aa29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 NMRAL1Q9HBL8 299 aa29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 ZNF358Q9NW07 568 aa29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 COPG2Q9UBF2 871 aa29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 ZNF711Q9Y462 761 aa29.16■■■□□ 2.26
CTDNEP1-208ENST00000573600 PIGNO95427 931 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 ADH1CP00326 375 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 POLR2EP19388 210 aaKnown RBP29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 TAS2R39P59534 338 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 RAD51Q06609 339 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 MYLK3Q32MK0 819 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 MBLAC2Q68D91 279 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 GPR149Q86SP6 731 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 CEP97Q8IW35 865 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 BPIFB1Q8TDL5 484 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 SMARCD2Q92925 531 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 ASB16Q96NS5 453 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 C19orf43Q9BQ61 176 aa29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 INTS10Q9NVR2 710 aaKnown RBP29.15■■■□□ 2.26
CTDNEP1-208ENST00000573600 H7C0S8 307 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 TGDSO95455 350 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 CYP17A1P05093 508 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 ALDH3A1P30838 453 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 SF3A3Q12874 501 aaKnown RBP eCLIP29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 PCLAFQ15004 111 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 TYSND1Q2T9J0 566 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 TSNAXIP1Q2TAA8 658 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 EML3Q32P44 896 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 ACCSLQ4AC99 568 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 CARD16Q5EG05 197 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 FAM78AQ5JUQ0 283 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 FAM45BPQ6NSW5 357 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 TMEM184AQ6ZMB5 413 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 PAF1Q8N7H5 531 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 FAM45AQ8TCE6 357 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 C7orf26Q96N11 449 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 SMIM14Q96QK8 99 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 TCF12Q99081 682 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 CPEB1Q9BZB8 566 aaKnown RBP29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 IGFLR1Q9H665 355 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 POLR3BQ9NW08 1133 aaPredicted RBP29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 OBP2AQ9NY56 170 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 GDE1Q9NZC3 331 aa29.14■■■□□ 2.26
CTDNEP1-208ENST00000573600 LAMA2P24043 3122 aaKnown RBP29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 HOXC11O43248 304 aaPredicted RBP29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 ADH5P11766 374 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 CPA3P15088 417 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 PMLP29590 882 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 KPNA2P52292 529 aaKnown RBP29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 STC1P52823 247 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 BST1Q10588 318 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 RBM20Q5T481 1227 aaKnown RBP29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 HECTD2Q5U5R9 776 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 PLPP6Q8IY26 295 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 NAT16Q8N8M0 369 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 PPP1R14CQ8TAE6 165 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 RDH11Q8TC12 318 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 FGF13Q92913 245 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 RSPRY1Q96DX4 576 aa29.14■■■□□ 2.25
CTDNEP1-208ENST00000573600 GPR63Q9BZJ6 419 aa29.14■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms