RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 NEMP1O14524 444 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 AURKAO14965 403 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 AREL1O15033 823 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 AXIN1O15169 862 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 SLC7A4O43246 635 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 BUD23O43709 281 aaKnown RBP13.54□□□□□ -0.24
LINC01996-201ENST00000573270 IGLV3-19P01714 112 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 C1SP09871 688 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 MYBL2P10244 700 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 CYP2A6P11509 494 aaPredicted RBP13.54□□□□□ -0.24
LINC01996-201ENST00000573270 FNTBP49356 437 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 ARL4CP56559 192 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 POLR2LP62875 67 aaKnown RBP13.54□□□□□ -0.24
LINC01996-201ENST00000573270 SARNPP82979 210 aaKnown RBP13.54□□□□□ -0.24
LINC01996-201ENST00000573270 CSTF1Q05048 431 aaKnown RBP13.54□□□□□ -0.24
LINC01996-201ENST00000573270 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
LINC01996-201ENST00000573270 BBS9Q3SYG4 887 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 MSS51Q4VC12 460 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 LRRC66Q68CR7 880 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 CRTC1Q6UUV9 634 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 MICALCLQ6ZW33 695 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 C1orf210Q8IVY1 113 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 IFT20Q8IY31 132 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 TTC30BQ8N4P2 665 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 FRMD1Q8N878 549 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 OR14C36Q8NHC7 312 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 RAB7BQ96AH8 199 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 SCRN2Q96FV2 425 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 TRIM56Q9BRZ2 755 aaKnown RBP13.54□□□□□ -0.24
LINC01996-201ENST00000573270 NFU1Q9UMS0 254 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 INVSQ9Y283 1065 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 NCKAP1Q9Y2A7 1128 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 PPIL1Q9Y3C6 166 aa13.54□□□□□ -0.24
LINC01996-201ENST00000573270 TNRC6BQ9UPQ9 1833 aaKnown RBP13.54□□□□□ -0.24
LINC01996-201ENST00000573270 CEP192Q8TEP8 1941 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 FAM47DPA6NHR8 397 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 AP1G1O43747 822 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 PPFIA2O75334 1257 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 ELFN1P0C7U0 828 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 MLNP12872 115 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 C6P13671 934 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 AVPR2P30518 371 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 ACSL1P33121 698 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 SUOXP51687 545 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 ZNF140P52738 457 aaPredicted RBP13.53□□□□□ -0.24
LINC01996-201ENST00000573270 DRG2P55039 364 aaKnown RBP13.53□□□□□ -0.24
LINC01996-201ENST00000573270 VSNL1P62760 191 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 CAV1Q03135 178 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 MSLNQ13421 630 aaPredicted RBP13.53□□□□□ -0.24
LINC01996-201ENST00000573270 CUL1Q13616 776 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 ARHGEF7Q14155 803 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 FASTKD3Q14CZ7 662 aaKnown RBP13.53□□□□□ -0.24
LINC01996-201ENST00000573270 MAP7D1Q3KQU3 841 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 MAP9Q49MG5 647 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 DNAJC21Q5F1R6 531 aaKnown RBP13.53□□□□□ -0.24
LINC01996-201ENST00000573270 SEL1L3Q68CR1 1132 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 MAMSTRQ6ZN01 415 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 CCDC25Q86WR0 208 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 NDUFAF2Q8N183 169 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 PPHLN1Q8NEY8 458 aaKnown RBP13.53□□□□□ -0.24
LINC01996-201ENST00000573270 CXorf40AQ8TE69 158 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 TOE1Q96GM8 510 aaKnown RBP13.53□□□□□ -0.24
LINC01996-201ENST00000573270 LYSMD1Q96S90 227 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 FMO2Q99518 471 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 ITM2CQ9NQX7 267 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC01996-201ENST00000573270 CHMP2BQ9UQN3 213 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 COQ6Q9Y2Z9 468 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 TCAF1Q9Y4C2 921 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 ARL5AQ9Y689 179 aa13.53□□□□□ -0.24
LINC01996-201ENST00000573270 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.24
LINC01996-201ENST00000573270 GOLGA8CPA6NN73 597 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 MMP20O60882 483 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 RNGTTO60942 597 aaKnown RBP13.52□□□□□ -0.25
LINC01996-201ENST00000573270 PCDH8O95206 1070 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 CLDN7O95471 211 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 SEMA4FO95754 770 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 BCKDHBP21953 392 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 NFKBIAP25963 317 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 TNFRSF8P28908 595 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 CD6P30203 668 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 LIG3P49916 1009 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 STC1P52823 247 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 SFSWAPQ12872 951 aaKnown RBP13.52□□□□□ -0.25
LINC01996-201ENST00000573270 PDIA2Q13087 525 aaKnown RBP13.52□□□□□ -0.25
LINC01996-201ENST00000573270 SMAD1Q15797 465 aaKnown RBP13.52□□□□□ -0.25
LINC01996-201ENST00000573270 CDKN3Q16667 212 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 TMEM52BQ4KMG9 183 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 HP1BP3Q5SSJ5 553 aaPredicted RBP13.52□□□□□ -0.25
LINC01996-201ENST00000573270 CASC4Q6P4E1 433 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 HSD11B1LQ7Z5J1 315 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 WDR5BQ86VZ2 330 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 ANKMY2Q8IV38 441 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 PDIK1LQ8N165 341 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 DNAJC1Q96KC8 554 aaKnown RBP13.52□□□□□ -0.25
LINC01996-201ENST00000573270 PKNOX2Q96KN3 472 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 SPACA7Q96KW9 195 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 FRMD8Q9BZ67 464 aaPredicted RBP13.52□□□□□ -0.25
LINC01996-201ENST00000573270 GPR63Q9BZJ6 419 aa13.52□□□□□ -0.25
LINC01996-201ENST00000573270 FAM129AQ9BZQ8 928 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms