RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ATXN1LP0C7T5 689 aaKnown RBP11.25□□□□□ -0.61
RPAIN-212ENST00000573126 SMIM18P0DKX4 95 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 PIM1P11309 404 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-212ENST00000573126 ATP6V1B1P15313 513 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 IMPDH1P20839 514 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 FGFR3P22607 806 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 OR1G1P47890 313 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 ARPP19P56211 112 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 NRG1Q02297 640 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-212ENST00000573126 STX5Q13190 355 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 TRIM25Q14258 630 aaKnown RBP11.25□□□□□ -0.61
RPAIN-212ENST00000573126 KCNA10Q16322 511 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 FBXO48Q5FWF7 155 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 PITRM1Q5JRX3 1037 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 TICAM1Q8IUC6 712 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 SLC22A9Q8IVM8 553 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 MARVELD2Q8N4S9 558 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 ADCY4Q8NFM4 1077 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 GABPB2Q8TAK5 448 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-212ENST00000573126 MYEOVQ96EZ4 313 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 FAR2Q96K12 515 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 UROC1Q96N76 676 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 UNC93B1Q9H1C4 597 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 MFSD1Q9H3U5 465 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 TMEM248Q9NWD8 314 aa11.25□□□□□ -0.61
RPAIN-212ENST00000573126 GMPR2Q9P2T1 348 aaKnown RBP11.25□□□□□ -0.61
RPAIN-212ENST00000573126 MRASO14807 208 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 MUSKO15146 869 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 DENRO43583 198 aaKnown RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 RAMP2O60895 175 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 PABPC4LP0CB38 370 aaKnown RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 PRSS56P0CW18 603 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 SLC2A3P11169 496 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 OR1E1P30953 314 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 SH3BP2P78314 561 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 POLD3Q15054 466 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 SLC14A2Q15849 920 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 ZNF678Q5SXM1 525 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 IYDQ6PHW0 289 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 ZNF598Q86UK7 904 aaKnown RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 RASAL3Q86YV0 1011 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 MFN1Q8IWA4 741 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 ARHGAP18Q8N392 663 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 TMEM102Q8N9M5 508 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 OR13C4Q8NGS5 318 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 EME1Q96AY2 570 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 C19orf60Q96EN9 201 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 RANBP9Q96S59 729 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 SH3GL3Q99963 347 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 Q9H521 79 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 SPAG4Q9NPE6 437 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 UTP6Q9NYH9 597 aaKnown RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 ACTL7AQ9Y615 435 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 FNDC1Q4ZHG4 1894 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 PTPRDP23468 1912 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 SNUPNO95149 360 aaKnown RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 PAPSS2O95340 614 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 GOT2P00505 430 aaKnown RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 SNRPB2P08579 225 aaKnown RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 CRHR2Q13324 411 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 SEMA3AQ14563 771 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 C10orf120Q5SQS8 335 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 MSANTD2Q6P1R3 559 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 ZNF549Q6P9A3 640 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 GLB1LQ6UWU2 654 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 PIP4K2CQ8TBX8 421 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 LPGAT1Q92604 370 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 ZCWPW1Q9H0M4 648 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 POLR3BQ9NW08 1133 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 GABRQQ9UN88 632 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 SLC27A5Q9Y2P5 690 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 AP4S1Q9Y587 144 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 NLRC5Q86WI3 1866 aa11.24□□□□□ -0.61
RPAIN-212ENST00000573126 TDRD15B5MCY1 1934 aaKnown RBP11.24□□□□□ -0.61
RPAIN-212ENST00000573126 ARHGEF37A1IGU5 675 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 UBXN8O00124 270 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 ALDOCP09972 364 aaKnown RBP11.23□□□□□ -0.61
RPAIN-212ENST00000573126 INHBCP55103 352 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 FOXA1P55317 472 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 MAPRE2Q15555 327 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 PFKFB4Q16877 469 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 UNC50Q53HI1 259 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 CLLU1OSQ5K130 101 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 IFNL1Q8IU54 200 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 PTGR2Q8N8N7 351 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-212ENST00000573126 ZFAND2BQ8WV99 257 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 LRTOMTQ8WZ04 291 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 BTN2A3PQ96KV6 586 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 NSUN5Q96P11 429 aaKnown RBP11.23□□□□□ -0.61
RPAIN-212ENST00000573126 PRPF18Q99633 342 aaKnown RBP11.23□□□□□ -0.61
RPAIN-212ENST00000573126 FBXO44Q9H4M3 255 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 IL1RL2Q9HB29 575 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 RRAGCQ9HB90 399 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 MARCH2Q9P0N8 246 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 SUCOQ9UBS9 1254 aaKnown RBP11.23□□□□□ -0.61
RPAIN-212ENST00000573126 RAB26Q9ULW5 256 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 LZTS1Q9Y250 596 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 DNAJC15Q9Y5T4 150 aa11.23□□□□□ -0.61
RPAIN-212ENST00000573126 SNX13Q9Y5W8 968 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms