RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 ISCUQ9H1K1 167 aa12.92□□□□□ -0.34
ATP2A3-211ENST00000572176 SYNDIG1Q9H7V2 258 aa12.92□□□□□ -0.34
ATP2A3-211ENST00000572176 CPNE5Q9HCH3 593 aa12.92□□□□□ -0.34
ATP2A3-211ENST00000572176 MRPL47Q9HD33 250 aaKnown RBP12.92□□□□□ -0.34
ATP2A3-211ENST00000572176 B4GALT6Q9UBX8 382 aa12.92□□□□□ -0.34
ATP2A3-211ENST00000572176 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 A0A1W2PQM1 296 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 H3BRJ5 948 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 ERVH48-1M5A8F1 160 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 CACNB4O00305 520 aaPredicted RBP12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 TNFRSF10CO14798 259 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 KLK10O43240 276 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 HTRA2O43464 458 aaPredicted RBP12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 TNFP01375 233 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 ITGA2BP08514 1039 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 SKILP12757 684 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 KELP23276 732 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 HSPA9P38646 679 aaKnown RBP12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 ZNF235Q14590 738 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 SMTNL2Q2TAL5 461 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 FIGNQ5HY92 759 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 POLNQ7Z5Q5 900 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 B3GNT8Q7Z7M8 397 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 PELI3Q8N2H9 469 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 ARL14Q8N4G2 192 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 WDR26Q9H7D7 661 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 MRPL40Q9NQ50 206 aaKnown RBP12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 AHCTF1Q8WYP5 2266 aa12.91□□□□□ -0.34
ATP2A3-211ENST00000572176 ZNF462Q96JM2 2506 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 A0A1W2PQ67 120 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 NOBOXO60393 691 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 SOCS5O75159 536 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 TNFSF15O95150 251 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 RPLP0P05388 317 aaKnown RBP12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 CCKBRP32239 447 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 ARL4AP40617 200 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 ZNF165P49910 485 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 CCL7P80098 99 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 RHDQ02161 417 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 C19orf57Q0VDD7 668 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 EIF3IQ13347 325 aaKnown RBP12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 CNGA3Q16281 694 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 BOLA3Q53S33 107 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 CERCAMQ5T4B2 595 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 ARHGAP40Q5TG30 622 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 HGSNATQ68CP4 663 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 FOXR1Q6PIV2 292 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 OGFOD3Q6PK18 319 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 TMCO3Q6UWJ1 677 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 PGBD5Q8N414 524 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 PAF1Q8N7H5 531 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 NUS1Q96E22 293 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 CCDC97Q96F63 343 aaPredicted RBP12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 COQ10AQ96MF6 247 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 CSPG4P5Q96PW8 444 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 GFM1Q96RP9 751 aaKnown RBP12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 MGME1Q9BQP7 344 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 FUCA2Q9BTY2 467 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 LGR4Q9BXB1 951 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 MYO1AQ9UBC5 1043 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 APPL1Q9UKG1 709 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 SCN8AQ9UQD0 1980 aa12.9□□□□□ -0.34
ATP2A3-211ENST00000572176 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 COL6A6A6NMZ7 2263 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 PRSS38A1L453 326 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 TTC24A2A3L6 582 aaPredicted RBP12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 A8MX80 341 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 PLD2O14939 933 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 MAFKO60675 156 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 HEXIM1O94992 359 aaKnown RBP12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 CPP00450 1065 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 RARAP10276 462 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 MYCLP1P12525 358 aaPredicted RBP12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 PNLIPP16233 465 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 AMPD1P23109 780 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 VIPR1P32241 457 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 INHBCP55103 352 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 SLC25A11Q02978 314 aaKnown RBP12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 VAC14Q08AM6 782 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 TRAF2Q12933 501 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 CLN3Q13286 438 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 HLTFQ14527 1009 aaKnown RBP eCLIP12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 NR1I3Q14994 352 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 IQCB1Q15051 598 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 ACOX1Q15067 660 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 C14orf28Q4W4Y0 310 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 RALGPS1Q5JS13 557 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 TXNRD3NBQ6F5E7 133 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 PNCKQ6P2M8 343 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 TAF8Q7Z7C8 310 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 CCNJLQ8IV13 435 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 SFTPA2Q8IWL1 248 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 ZNF843Q8N446 348 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 ATPAF2Q8N5M1 289 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 NIPA2Q8N8Q9 360 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 TEKT4Q8WW24 435 aa12.89□□□□□ -0.35
ATP2A3-211ENST00000572176 HSPH1Q92598 858 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms