RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 NFKBIAP25963 317 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 VIPR1P32241 457 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 KIAA1024LP59773 190 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 GABREP78334 506 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 ITKQ08881 620 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 RTP5Q14D33 572 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 AGERQ15109 404 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 CNGA3Q16281 694 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 SLC18A3Q16572 532 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 TSR1Q2NL82 804 aaKnown RBP13.69□□□□□ -0.22
PRPF8-202ENST00000571346 CDCP2Q5VXM1 449 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 KCTD16Q68DU8 428 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 NCBP2-AS2Q69YL0 99 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 H2AFVQ71UI9 128 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 PDZD3Q86UT5 571 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 GKN2Q86XP6 184 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 ARL10Q8N8L6 244 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 KCTD6Q8NC69 237 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 SCG3Q8WXD2 468 aaKnown RBP13.69□□□□□ -0.22
PRPF8-202ENST00000571346 NAT6Q93015 286 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 FUBP1Q96AE4 644 aaKnown RBP13.69□□□□□ -0.22
PRPF8-202ENST00000571346 ZNF670Q9BS34 389 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 FGF22Q9HCT0 170 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 GULP1Q9UBP9 304 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 MOSPD1Q9UJG1 213 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 NENFQ9UMX5 172 aa13.69□□□□□ -0.22
PRPF8-202ENST00000571346 KNTC1P50748 2209 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 A0A1W2PQ67 120 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 EME2A4GXA9 379 aaPredicted RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 CFAP69A5D8W1 941 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 NPIPB15A6NHN6 443 aaPredicted RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 RRP8O43159 456 aaKnown RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 HTRA2O43464 458 aaPredicted RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 CYP2A6P11509 494 aaPredicted RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 CTPS1P17812 591 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 CR2P20023 1033 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 HNRNPH3P31942 346 aaKnown RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 GARSP41250 739 aaKnown RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 TAS2R40P59535 323 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 ATP13A4Q4VNC1 1196 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 ANKRD20A8PQ5CZ79 823 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 C3orf38Q5JPI3 329 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 PERM1Q5SV97 790 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 ARMC12Q5T9G4 340 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 LRRC69Q6ZNQ3 347 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 RBM44Q6ZP01 1051 aaKnown RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 USP45Q70EL2 814 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 OR56A4Q8NGH8 313 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 OR1E3Q8WZA6 343 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 CRELD1Q96HD1 420 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 DNAJC7Q99615 494 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 SEMA3CQ99985 751 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 CCDC3Q9BQI4 270 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 POLR1EQ9GZS1 481 aaKnown RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 MRPL40Q9NQ50 206 aaKnown RBP13.68□□□□□ -0.22
PRPF8-202ENST00000571346 ABHD10Q9NUJ1 306 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 GPR34Q9UPC5 381 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 CACNA1GO43497 2377 aa13.68□□□□□ -0.22
PRPF8-202ENST00000571346 URB1O60287 2271 aaKnown RBP13.67□□□□□ -0.22
PRPF8-202ENST00000571346 A0A087WV48 116 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 TMEM202A6NGA9 273 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 MFAP3LO75121 409 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 HEXIM1O94992 359 aaKnown RBP13.67□□□□□ -0.22
PRPF8-202ENST00000571346 PGLSO95336 258 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 TNFP01375 233 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 KRT7P08729 469 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 GM2AP17900 193 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 LHCGRP22888 699 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 KELP23276 732 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 IL4RP24394 825 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 ACTN2P35609 894 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 ETV3P41162 512 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 GALNT2Q10471 571 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 ARHGEF7Q14155 803 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 SPIDRQ14159 915 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 MESDQ14696 234 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 RALGPS1Q5JS13 557 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 TIGD7Q6NT04 549 aaPredicted RBP13.67□□□□□ -0.22
PRPF8-202ENST00000571346 HEATR4Q86WZ0 1026 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 MAP7D3Q8IWC1 876 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 CACTIN-AS1Q8N1I8 211 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 PELI3Q8N2H9 469 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 OR8K1Q8NGG5 319 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 LRRN4Q8WUT4 740 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 ZNF830Q96NB3 372 aaPredicted RBP13.67□□□□□ -0.22
PRPF8-202ENST00000571346 SPTLC3Q9NUV7 552 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 LCMT1Q9UIC8 334 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 PADI4Q9UM07 663 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 PHTF1Q9UMS5 762 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 RAI2Q9Y5P3 530 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 BPTFQ12830 3046 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 IGSF10Q6WRI0 2623 aa13.67□□□□□ -0.22
PRPF8-202ENST00000571346 COL27A1Q8IZC6 1860 aaPredicted RBP13.67□□□□□ -0.22
PRPF8-202ENST00000571346 B4DGG1 531 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 CASC3O15234 703 aaKnown RBP13.66□□□□□ -0.22
PRPF8-202ENST00000571346 TMEM253P0C7T8 217 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 MYCLP1P12525 358 aaPredicted RBP13.66□□□□□ -0.22
PRPF8-202ENST00000571346 ITPKBP27987 946 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 MAN1A1P33908 653 aa13.66□□□□□ -0.22
PRPF8-202ENST00000571346 EIF2S3P41091 472 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms