RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 C1QTNF3-AMACRE9PGA6 284 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 APOC4-APOC2K7ER74 178 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 RNF103O00237 685 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 MUSKO15146 869 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 MATN3O15232 486 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 SDC3O75056 442 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 USP12O75317 370 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 LEFTY1O75610 366 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 GSRP00390 522 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 APOC2P02655 101 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 CCNB1P14635 433 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 PTPN7P35236 360 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 RXRGP48443 463 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 NR2C2P49116 596 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 RENBPP51606 427 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 EIF3EP60228 445 aaKnown RBP13.42□□□□□ -0.26
CCDC40-205ENST00000571028 RAD51Q06609 339 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 PPIDQ08752 370 aaKnown RBP13.42□□□□□ -0.26
CCDC40-205ENST00000571028 RFTN1Q14699 578 aaPredicted RBP13.42□□□□□ -0.26
CCDC40-205ENST00000571028 DARS2Q6PI48 645 aaKnown RBP13.42□□□□□ -0.26
CCDC40-205ENST00000571028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.42□□□□□ -0.26
CCDC40-205ENST00000571028 SLC13A5Q86YT5 568 aaPredicted RBP13.42□□□□□ -0.26
CCDC40-205ENST00000571028 PGBD5Q8N414 524 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 OR14C36Q8NHC7 312 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 TTC9Q92623 222 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 ISG20Q96AZ6 181 aaKnown RBP13.42□□□□□ -0.26
CCDC40-205ENST00000571028 HDAC11Q96DB2 347 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 ZNF599Q96NL3 588 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 TSGA13Q96PP4 275 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 WDR24Q96S15 920 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 EBF2Q9HAK2 575 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 DYRK4Q9NR20 520 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 SERGEFQ9UGK8 458 aa13.42□□□□□ -0.26
CCDC40-205ENST00000571028 R3HDM2Q9Y2K5 976 aaKnown RBP13.42□□□□□ -0.26
CCDC40-205ENST00000571028 NYNRINQ9P2P1 1898 aaKnown RBP13.42□□□□□ -0.26
CCDC40-205ENST00000571028 A0A1W2PR77 199 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 F5H423 210 aaPredicted RBP13.41□□□□□ -0.26
CCDC40-205ENST00000571028 SIGLEC6O43699 453 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 PIGNO95427 931 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 POP4O95707 220 aaKnown RBP13.41□□□□□ -0.26
CCDC40-205ENST00000571028 PEX11BO96011 259 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 PRNPP04156 253 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 UGT2B4P06133 528 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 ZBTB17Q13105 803 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 SNX1Q13596 522 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 NOMO1Q15155 1222 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 LONRF2Q1L5Z9 754 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 PROX2Q3B8N5 592 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 C6orf132Q5T0Z8 1188 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 FAM46CQ5VWP2 391 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 NAPEPLDQ6IQ20 393 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 SRLQ86TD4 932 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 C1orf54Q8WWF1 131 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 ATG4AQ8WYN0 398 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 ARRDC3Q96B67 414 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 CCDC97Q96F63 343 aaPredicted RBP13.41□□□□□ -0.26
CCDC40-205ENST00000571028 AGAP3Q96P47 875 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 OLFM3Q96PB7 478 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 TRIM4Q9C037 500 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 ABCG4Q9H172 646 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 CARD9Q9H257 536 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 POLR1BQ9H9Y6 1135 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 EVA1BQ9NVM1 165 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 WDR70Q9NW82 654 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 PPM1HQ9ULR3 514 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 EFR3BQ9Y2G0 817 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 WASF2Q9Y6W5 498 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 KNTC1P50748 2209 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 KNL1Q8NG31 2342 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 SPTA1P02549 2419 aa13.41□□□□□ -0.26
CCDC40-205ENST00000571028 TBC1D3DA0A087WVF3 549 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 TBC1D3IA0A087WXS9 549 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 TBC1D3EA0A087X179 549 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 TBC1D3KA0A087X1G2 549 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 CXorf51AA0A1B0GTR3 108 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 TBC1D3FA6NER0 549 aaPredicted RBP13.4□□□□□ -0.26
CCDC40-205ENST00000571028 TBC1D3LB9A6J9 549 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 WNT9AO14904 365 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 ALOX15BO15296 676 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 CSO75390 466 aaKnown RBP13.4□□□□□ -0.26
CCDC40-205ENST00000571028 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
CCDC40-205ENST00000571028 ADH1BP00325 375 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 FGGP02679 453 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 NTRK1P04629 796 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 HLA-DQB2P05538 268 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 TBC1D3HP0C7X1 549 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 RBP3P10745 1247 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 C5AR1P21730 350 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 RBL1P28749 1068 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 RBMS1P29558 406 aaKnown RBP13.4□□□□□ -0.26
CCDC40-205ENST00000571028 LSSP48449 732 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 DSC2Q02487 901 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 NFATC3Q12968 1075 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 STAT4Q14765 748 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 KIAA1614Q5VZ46 1190 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 TBC1D3GQ6DHY5 549 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 TBC1D3CQ6IPX1 549 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 PRPF39Q86UA1 669 aaKnown RBP13.4□□□□□ -0.26
CCDC40-205ENST00000571028 CAMK1DQ8IU85 385 aa13.4□□□□□ -0.26
CCDC40-205ENST00000571028 CDKL3Q8IVW4 592 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms