RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 DPPA4Q7L190 304 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 EFL1Q7Z2Z2 1120 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 HID1Q8IV36 788 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 PDCD6IPQ8WUM4 868 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 HNRNPLLQ8WVV9 542 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 NAT6Q93015 286 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 MGME1Q9BQP7 344 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 APOOQ9BUR5 198 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 NPDC1Q9NQX5 325 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 KLQ9UEF7 1012 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 PNMA8BQ9ULN7 279 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 OR1A2Q9Y585 309 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 DOCK9Q9BZ29 2069 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 ARID1BQ8NFD5 2236 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 A0A087WV48 116 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 CACNB4O00305 520 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 PEX11BO96011 259 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 CPP00450 1065 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 TPM1P09493 284 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 CTSEP14091 401 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 HNRNPH3P31942 346 aaKnown RBP12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 MMP13P45452 471 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 ACOX1Q15067 660 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 ALG11Q2TAA5 492 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 COL28A1Q2UY09 1125 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 MARC1Q5VT66 337 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 SPECC1LQ69YQ0 1117 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 ESRP1Q6NXG1 681 aaKnown RBP12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 ENPP7Q6UWV6 458 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 LIPIQ6XZB0 460 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 LIAT1Q6ZQX7 453 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 RD3Q7Z3Z2 195 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 LRRC49Q8IUZ0 686 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 SLC35F3Q8IY50 421 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 SCG3Q8WXD2 468 aaKnown RBP12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 TSACCQ96A04 125 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 WDR92Q96MX6 357 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 NUDCD1Q96RS6 583 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 BOCQ9BWV1 1114 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 NOD2Q9HC29 1040 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 ZNHIT6Q9NWK9 470 aaKnown RBP12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 UVRAGQ9P2Y5 699 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 B4GALT6Q9UBX8 382 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 LCMT1Q9UIC8 334 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 NENFQ9UMX5 172 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 PCDHB1Q9Y5F3 818 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 PCDHGC4Q9Y5F7 938 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 KNTC1P50748 2209 aa12.41□□□□□ -0.42
CTDNEP1-205ENST00000570828 TTC24A2A3L6 582 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 EME2A4GXA9 379 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 A8MX80 341 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 YY2O15391 372 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 HTRA2O43464 458 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 MFSD11O43934 449 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 BRINP1O60477 761 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 CSO75390 466 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 PROSCO94903 275 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 CELA2BP08218 269 aaPredicted RBP12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 KRT7P08729 469 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 CD48P09326 243 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 H2AFZP0C0S5 128 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 CR2P20023 1033 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 KELP23276 732 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 KIAA1024LP59773 190 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 SRP54P61011 504 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 MAXP61244 160 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 DPYSL3Q14195 570 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 TCEA2Q15560 299 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 SLC18A3Q16572 532 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 RALGPS1Q5JS13 557 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 ZFYVE27Q5T4F4 411 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 CDCP2Q5VXM1 449 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 H2AFVQ71UI9 128 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 PGBD5Q8N414 524 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 ARL10Q8N8L6 244 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 KCTD6Q8NC69 237 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 PLA2G15Q8NCC3 412 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 OR8K1Q8NGG5 319 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 TPCN2Q8NHX9 752 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 PCDH19Q8TAB3 1148 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 NUS1Q96E22 293 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 PDXPQ96GD0 296 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 DNAJC7Q99615 494 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 ZNF670Q9BS34 389 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 CLPBQ9H078 707 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 WDR26Q9H7D7 661 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 HAUS2Q9NVX0 235 aa12.4□□□□□ -0.42
CTDNEP1-205ENST00000570828 CACNA1GO43497 2377 aa12.4□□□□□ -0.43
CTDNEP1-205ENST00000570828 SSU72P8A0A1W2PR75 194 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 RRP8O43159 456 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 AKR1B10O60218 316 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 USP12O75317 370 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 CYP2A6P11509 494 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 KRT10P13645 584 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 TGM2P21980 687 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 IL4RP24394 825 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 VIPR1P32241 457 aa12.39□□□□□ -0.43
CTDNEP1-205ENST00000570828 ACTN2P35609 894 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms