RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 KCTD3Q9Y597 815 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 CKAP5Q14008 2032 aa15.46■□□□□ 0.07
HERPUD1-219ENST00000570273 A0A087WUV0 522 aaPredicted RBP15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 C1orf232A0A0U1RR37 186 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 TCRBV21S2A2A0A5A6 115 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 C2orf81A6NN90 581 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 CHURC1-FNTBB4DL54 471 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 PLK4O00444 970 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 AURKAO14965 403 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 LDB2O43679 373 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 BUD23O43709 281 aaKnown RBP15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 C5AR1P21730 350 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 VIPR1P32241 457 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 STX2P32856 288 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 ZNF140P52738 457 aaPredicted RBP15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 FAM193AP78312 1265 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 SEMG2Q02383 582 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 SLC29A2Q14542 456 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 FBXL19Q6PCT2 694 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 TMEM92Q6UXU6 159 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 TRIM67Q6ZTA4 783 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 C3orf62Q6ZUJ4 267 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 ERN2Q76MJ5 926 aaKnown RBP15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 HDXQ7Z353 690 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 TTC7BQ86TV6 843 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 FLCNQ8NFG4 579 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 MFSD3Q96ES6 412 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 ZNF778Q96MU6 729 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 FCRL3Q96P31 734 aaPredicted RBP15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 LYSMD1Q96S90 227 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 HDAC8Q9BY41 377 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 SLC6A17Q9H1V8 727 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 SLC2A6Q9UGQ3 507 aa15.45■□□□□ 0.06
HERPUD1-219ENST00000570273 MYLKQ15746 1914 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 A0A0U1RQS6 177 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 MROH6A6NGR9 719 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 A8MX80 341 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 ATG13O75143 517 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 PAPSS2O95340 614 aaPredicted RBP15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 DNTTP04053 509 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 ADRB3P13945 408 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 PAMP19021 973 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 LPOP22079 712 aaPredicted RBP15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 PDE1BQ01064 536 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 CNTN1Q12860 1018 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 SMAD1Q15797 465 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 LRRC66Q68CR7 880 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 ESRP1Q6NXG1 681 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 CRTC1Q6UUV9 634 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 KIAA1324Q6UXG2 1013 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 DPPA4Q7L190 304 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 TMEM135Q86UB9 458 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 TSPAN33Q86UF1 283 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 TMPRSS6Q8IU80 811 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 PJA1Q8NG27 643 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 OR13C4Q8NGS5 318 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 FBF1Q8TES7 1133 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 GANCQ8TET4 914 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 STYXQ8WUJ0 223 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 PBXIP1Q96AQ6 731 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 DNAJC1Q96KC8 554 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 MKRN2Q9H000 416 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 ZFYVE1Q9HBF4 777 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 CD248Q9HCU0 757 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 TREX1Q9NSU2 369 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 RIMKLBQ9ULI2 386 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 PLAAQ9Y263 795 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 ITM2BQ9Y287 266 aa15.44■□□□□ 0.06
HERPUD1-219ENST00000570273 ZCWPW2A0A1B0GU75 182 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 TCRBV9S1A1TA0A576 114 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 STX7O15400 261 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 CLDN7O95471 211 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 LHCGRP22888 699 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 MMP12P39900 470 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 P2RY2P41231 377 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 SUOXP51687 545 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 TMPRSS15P98073 1019 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 SIGLEC14Q08ET2 396 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 IFFO1Q0D2I5 559 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 ELP6Q0PNE2 266 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 FZD5Q13467 585 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 ARHGEF7Q14155 803 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 CNGA3Q16281 694 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 CRY1Q16526 586 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 SKIDA1Q1XH10 827 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 TTC31Q49AM3 519 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 KIAA0930Q6ICG6 404 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 TRMT10BQ6PF06 316 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 RASSF3Q86WH2 238 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 HDDC3Q8N4P3 179 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 AADATQ8N5Z0 425 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 OR4K2Q8NGD2 314 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 PEX13Q92968 403 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 SIPA1Q96FS4 1042 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 OSBPL6Q9BZF3 934 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 MFSD1Q9H3U5 465 aa15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 POLMQ9NP87 494 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 C20orf96Q9NUD7 363 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-219ENST00000570273 PKP3Q9Y446 797 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms