RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SCG3Q8WXD2 468 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CTTNBP2NLQ9P2B4 639 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 B4GALT6Q9UBX8 382 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 KLQ9UEF7 1012 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MFSD11O43934 449 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MTA2O94776 668 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 HEXIM1O94992 359 aaKnown RBP17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PGLSO95336 258 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CPP00450 1065 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PRKCGP05129 697 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CD48P09326 243 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CCNCP24863 283 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 VIPR1P32241 457 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TRAF2Q12933 501 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MMRN1Q13201 1228 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CDKN3Q16667 212 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ANKRD20A8PQ5CZ79 823 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TIGD7Q6NT04 549 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 EFL1Q7Z2Z2 1120 aaKnown RBP17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 GKN2Q86XP6 184 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 VSTM4Q8IW00 320 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 LSMEM2Q8N112 164 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ARL10Q8N8L6 244 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PLA2G15Q8NCC3 412 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 OR6C4Q8NGE1 309 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PCDH19Q8TAB3 1148 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MAPK15Q8TD08 544 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 FUBP1Q96AE4 644 aaKnown RBP17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 SCRN2Q96FV2 425 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ABCG4Q9H172 646 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 OR1A2Q9Y585 309 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PCDHGC4Q9Y5F7 938 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 AK5Q9Y6K8 562 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 BPTFQ12830 3046 aa17.13■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PTPRQQ9UMZ3 2332 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ZFC3H1O60293 1989 aaKnown RBP17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CACNB4O00305 520 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PDE2AO00408 941 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MATN3O15232 486 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TLX3O43711 291 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 FZD6O60353 706 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 BRINP1O60477 761 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PCCBP05166 539 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CYP2A6P11509 494 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MYF5P13349 255 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TGM2P21980 687 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ACTN2P35609 894 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ARHGAP25P42331 645 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 LSSP48449 732 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 C1orf61Q13536 156 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CNGA3Q16281 694 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 IFI16Q16666 785 aaKnown RBP17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 COL28A1Q2UY09 1125 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TBC1D25Q3MII6 688 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PNCKQ6P2M8 343 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ENPP7Q6UWV6 458 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 HID1Q8IV36 788 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 OR56A4Q8NGH8 313 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 FGF11Q92914 225 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TSACCQ96A04 125 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 DTD2Q96FN9 168 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ZNF578Q96N58 590 aaPredicted RBP17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PACSIN1Q9BY11 444 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 POLR1EQ9GZS1 481 aaKnown RBP17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ABHD10Q9NUJ1 306 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 HAUS2Q9NVX0 235 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PADI4Q9UM07 663 aa17.12■□□□□ 0.33
MAP1LC3B-208ENST00000570189 KIF26BQ2KJY2 2108 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 NTN3O00634 580 aaPredicted RBP17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CSO75390 466 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TNFP01375 233 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MYCLP1P12525 358 aaPredicted RBP17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CTSEP14091 401 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TAS2R40P59535 323 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ERVPABLB-1P60509 514 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 SEMG2Q02383 582 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 DPTQ07507 201 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TCEAL1Q15170 157 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ISXQ2M1V0 245 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ATP13A4Q4VNC1 1196 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PERM1Q5SV97 790 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ARMC12Q5T9G4 340 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 OGFOD3Q6PK18 319 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 NLRP8Q86W28 1048 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 KCTD6Q8NC69 237 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PIH1D2Q8WWB5 315 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 HDAC11Q96DB2 347 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 NUS1Q96E22 293 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PDXPQ96GD0 296 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TEX101Q9BY14 249 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 WDR26Q9H7D7 661 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 ZNHIT6Q9NWK9 470 aaKnown RBP17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 PCDHB1Q9Y5F3 818 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 IGSF10Q6WRI0 2623 aa17.11■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TTC24A2A3L6 582 aaPredicted RBP17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TMEM202A6NGA9 273 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MFAP3LO75121 409 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CELA2BP08218 269 aaPredicted RBP17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TPM1P09493 284 aa17.1■□□□□ 0.33
MAP1LC3B-208ENST00000570189 KRT10P13645 584 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms