RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 CTNNA3Q9UI47 895 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 CDH22Q9UJ99 828 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 ZDHHC9Q9Y397 364 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 INSL6Q9Y581 213 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 SNX14Q9Y5W7 946 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 PMF1-BGLAPU3KQ54 211 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF318Q5VUA4 2279 aa3.33□□□□□ -1.88
CNOT1-221ENST00000569924 MYO7AQ13402 2215 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 NAV2Q8IVL1 2488 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ANKRD11Q6UB99 2663 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CYP3A7-CYP3A51PA0A087WV96 503 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 A0A0D9SFI3 127 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 TEX13CA0A0J9YWL9 993 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 A8MVJ9 347 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 KIAA1324LA8MWY0 1029 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 RSPH10B2B2RC85 870 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 F5H697 171 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 TAF4O00268 1085 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 DCXO43602 365 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 SLU7O95391 586 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 GGPS1O95749 300 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 PLA2G1BP04054 148 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CYP1A1P04798 512 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 RSPH10BP0C881 870 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF286BP0CG31 522 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 GOLGA8HP0CJ92 632 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 PEPDP12955 493 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ARSAP15289 507 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 KCNA5P22460 613 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CYP3A7P24462 503 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 HOXC8P31273 242 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 TTKP33981 857 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 KRT2P35908 639 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 HNF4AP41235 474 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CAPZA2P47755 286 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 LIMS1P48059 325 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 NDUFV1P49821 464 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ANXA11P50995 505 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 PDE1AP54750 535 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ARHGAP8P85298 464 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 EFNB1P98172 346 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CDK18Q07002 472 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 GOLGA8DPQ0D2H9 430 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 TRAF1Q13077 416 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CBFBQ13951 182 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 PCLAFQ15004 111 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ST3GAL2Q16842 350 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 QRICH1Q2TAL8 776 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF568Q3ZCX4 644 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 USH1GQ495M9 461 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 MMEL1Q495T6 779 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 TTC31Q49AM3 519 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 EPC2Q52LR7 807 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ASPRV1Q53RT3 343 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 C9orf152Q5JTZ5 239 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 RBM20Q5T481 1227 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ZNF618Q5T7W0 954 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ARHGEF16Q5VV41 709 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 SLC9A4Q6AI14 798 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 KRT80Q6KB66 452 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 HMBOX1Q6NT76 420 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 MTHFD1LQ6UB35 978 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 C16orf89Q6UX73 402 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 KIAA1324Q6UXG2 1013 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 SEPT14Q6ZU15 432 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 STOX1Q6ZVD7 989 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 RAPH1Q70E73 1250 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 USP51Q70EK9 711 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CHST3Q7LGC8 479 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CCDC186Q7Z3E2 898 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 TMCO2Q7Z6W1 182 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 RALYLQ86SE5 291 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 SDCCAG8Q86SQ7 713 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 GLRX5Q86SX6 157 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 DNAAF5Q86Y56 855 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 TBC1D10CQ8IV04 446 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ARHGAP12Q8IWW6 846 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 LMNTD2Q8IXW0 634 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 ADGRF4Q8IZF3 695 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 NUP93Q8N1F7 819 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 FAM109AQ8N4B1 249 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 NAT8LQ8N9F0 302 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 Q8NA96 180 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 OR52N2Q8NGI0 321 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CLEC4CQ8WTT0 213 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 DEPDC1BQ8WUY9 529 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 OSCP1Q8WVF1 389 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 SMARCE1Q969G3 411 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 TOP1MTQ969P6 601 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 CCDC47Q96A33 483 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 VPS33AQ96AX1 596 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 FAM149B1Q96BN6 582 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 RMDN1Q96DB5 314 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 PABPC5Q96DU9 382 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 TRMT61AQ96FX7 289 aaKnown RBP3.32□□□□□ -1.88
CNOT1-221ENST00000569924 PGAM5Q96HS1 289 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 KLHL15Q96M94 604 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 FNBP1Q96RU3 617 aa3.32□□□□□ -1.88
CNOT1-221ENST00000569924 KLHL4Q9C0H6 718 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms