RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 CYP2A6P11509 494 aaPredicted RBP20.34■□□□□ 0.85
CLK3-225ENST00000569063 JUPP14923 745 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 ZFXP17010 805 aaPredicted RBP20.34■□□□□ 0.85
CLK3-225ENST00000569063 DUSP3P51452 185 aaPredicted RBP20.34■□□□□ 0.85
CLK3-225ENST00000569063 HK3P52790 923 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 PPIDQ08752 370 aaKnown RBP20.34■□□□□ 0.85
CLK3-225ENST00000569063 IHHQ14623 411 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 ACOX1Q15067 660 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 CNGA3Q16281 694 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 ALG11Q2TAA5 492 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 ESRP1Q6NXG1 681 aaKnown RBP20.34■□□□□ 0.85
CLK3-225ENST00000569063 CCDC13Q8IYE1 715 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 CCNYQ8ND76 341 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 ARRDC2Q8TBH0 407 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.34■□□□□ 0.85
CLK3-225ENST00000569063 LRRN4Q8WUT4 740 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 IL12RB2Q99665 862 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 PCDHA13Q9Y5I0 950 aa20.34■□□□□ 0.85
CLK3-225ENST00000569063 EPG5Q9HCE0 2579 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 TRABD2BA6NFA1 517 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 NPIPB15A6NHN6 443 aaPredicted RBP20.33■□□□□ 0.85
CLK3-225ENST00000569063 PSMD11O00231 422 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 APOL1O14791 398 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 SPOPO43791 374 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 KRT1P04264 644 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 HLA-DQB2P05538 268 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 PDHA1P08559 390 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 FECHP22830 423 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 LHCGRP22888 699 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 NOP2P46087 812 aaKnown RBP20.33■□□□□ 0.85
CLK3-225ENST00000569063 KIAA1024LP59773 190 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 SRP54P61011 504 aaKnown RBP20.33■□□□□ 0.85
CLK3-225ENST00000569063 INSM1Q01101 510 aaPredicted RBP20.33■□□□□ 0.85
CLK3-225ENST00000569063 DSC2Q02487 901 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 SPA17Q15506 151 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 DEFB133Q30KQ1 61 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 HES3Q5TGS1 186 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 PNCKQ6P2M8 343 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 ENPP7Q6UWV6 458 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 USP45Q70EL2 814 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 NDUFAF2Q8N183 169 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 FSTL5Q8N475 847 aaPredicted RBP20.33■□□□□ 0.85
CLK3-225ENST00000569063 PDCD7Q8N8D1 485 aaKnown RBP20.33■□□□□ 0.85
CLK3-225ENST00000569063 FUBP1Q96AE4 644 aaKnown RBP20.33■□□□□ 0.85
CLK3-225ENST00000569063 WDR92Q96MX6 357 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 LGMNQ99538 433 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 BOCQ9BWV1 1114 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 CLPBQ9H078 707 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 CCDC86Q9H6F5 360 aaKnown RBP20.33■□□□□ 0.85
CLK3-225ENST00000569063 DKK4Q9UBT3 224 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 HYOU1Q9Y4L1 999 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 HEY1Q9Y5J3 304 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 ALG6Q9Y672 507 aa20.33■□□□□ 0.85
CLK3-225ENST00000569063 A0A0A6YYK5 440 aaPredicted RBP20.32■□□□□ 0.84
CLK3-225ENST00000569063 KRT37O76014 449 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 RASGRP1O95267 797 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 MYF5P13349 255 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 KRT10P13645 584 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 TSHRP16473 764 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 CYLC1P35663 651 aaPredicted RBP20.32■□□□□ 0.84
CLK3-225ENST00000569063 CLDN6P56747 220 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 IFI35P80217 286 aaPredicted RBP20.32■□□□□ 0.84
CLK3-225ENST00000569063 TARDBPQ13148 414 aaKnown RBP eCLIP20.32■□□□□ 0.843e-6■■■□□ 14.6
CLK3-225ENST00000569063 C1orf61Q13536 156 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 ELOCQ15369 112 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 ODF2Q5BJF6 829 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 HSD11B1LQ7Z5J1 315 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 GAS2L3Q86XJ1 694 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 PROSER1Q86XN7 944 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 HID1Q8IV36 788 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 SDR16C5Q8N3Y7 309 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 TSACCQ96A04 125 aaPredicted RBP20.32■□□□□ 0.84
CLK3-225ENST00000569063 RNF25Q96BH1 459 aaPredicted RBP20.32■□□□□ 0.84
CLK3-225ENST00000569063 NUS1Q96E22 293 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 OLFM3Q96PB7 478 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 TDRD1Q9BXT4 1180 aaKnown RBP20.32■□□□□ 0.84
CLK3-225ENST00000569063 LUC7LQ9NQ29 371 aaKnown RBP20.32■□□□□ 0.84
CLK3-225ENST00000569063 KLQ9UEF7 1012 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 TTLL3Q9Y4R7 772 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 DGKBQ9Y6T7 804 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 FREM2Q5SZK8 3169 aa20.32■□□□□ 0.84
CLK3-225ENST00000569063 SRRM3A6NNA2 597 aaPredicted RBP20.31■□□□□ 0.84
CLK3-225ENST00000569063 KCNK1O00180 336 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 TAF4O00268 1085 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 CACNB4O00305 520 aaPredicted RBP20.31■□□□□ 0.84
CLK3-225ENST00000569063 TNFRSF10CO14798 259 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 YY2O15391 372 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 PSTPIP1O43586 416 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 JCHAINP01591 159 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 ANXA6P08133 673 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 TNNT1P13805 278 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 CTSEP14091 401 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 CTPS1P17812 591 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 NIPAL4Q0D2K0 466 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 ARHGEF7Q14155 803 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 PDK1Q15118 436 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 PTPRRQ15256 657 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 TAZQ16635 292 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 LVRNQ6Q4G3 990 aa20.31■□□□□ 0.84
CLK3-225ENST00000569063 DTD2Q96FN9 168 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms