RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 LRRC19Q9H756 370 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 TUBD1Q9UJT1 453 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 HECTD1Q9ULT8 2610 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 FZD10Q9ULW2 581 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 PCDHGA3Q9Y5H0 932 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 PRSS38A1L453 326 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 ARHGAP42A6NI28 874 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 BUB1BO60566 1050 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 CCNB1P14635 433 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 CHRNB2P17787 502 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 NFKBIAP25963 317 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 GPR3P46089 330 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 BCL2L1Q07817 233 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 ILF3Q12906 894 aaKnown RBP eCLIP15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 SRSF6Q13247 344 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 RFTN1Q14699 578 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 SYCP1Q15431 976 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 TCP11X2Q5H9J9 407 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 LIPIQ6XZB0 460 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 DPPA4Q7L190 304 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 SRLQ86TD4 932 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 VASH2Q86V25 355 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 CAMK1DQ8IU85 385 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 PLA2G15Q8NCC3 412 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 TAAR9Q96RI9 348 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 FUCA2Q9BTY2 467 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 CDH19Q9H159 772 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 GANQ9H2C0 597 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 CYP4F12Q9HCS2 524 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 TRNAU1APQ9NX07 287 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 NAV2Q8IVL1 2488 aa15.8■□□□□ 0.12
HERPUD1-215ENST00000568676 UBR5O95071 2799 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 RHPN2P1A8MT19 583 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 CAPN5O15484 640 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 CCP110O43303 1012 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 PALMO75781 387 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 TPM2P07951 284 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 MYCLP1P12525 358 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 JAM2P57087 298 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 TPI1P60174 286 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 SRSF1Q07955 248 aaKnown RBP eCLIP15.79■□□□□ 0.125e-9■■■■□ 26.7
HERPUD1-215ENST00000568676 RALGDSQ12967 914 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 SQSTM1Q13501 440 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 C16orf72Q14CZ0 275 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 PNCKQ6P2M8 343 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 BORAQ6PGQ7 559 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 PHLDB2Q86SQ0 1253 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 ZSWIM9Q86XI8 627 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 PAF1Q8N7H5 531 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 NETO2Q8NC67 525 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 CATSPER2Q96P56 530 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 CNPY3Q9BT09 278 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 SEMA6CQ9H3T2 930 aa15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 MRPL40Q9NQ50 206 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 PHPT1Q9NRX4 125 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-215ENST00000568676 LRRK1Q38SD2 2015 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 UNC13CQ8NB66 2214 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 J3KR12 359 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 B4GAT1O43505 415 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 NTRK1P04629 796 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 RENBPP51606 427 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 POLR2FP61218 127 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 AP1S1P61966 158 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 BIRC2Q13490 618 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 CLEC16AQ2KHT3 1053 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 DPCR1Q3MIW9 517 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 HSP90AA4PQ58FG1 418 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 FKBP15Q5T1M5 1219 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 KCTD16Q68DU8 428 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 DNAJC24Q6P3W2 148 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 TMPRSS9Q7Z410 1059 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 TSEN2Q8NCE0 465 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 AGBL5Q8NDL9 886 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 ZDHHC1Q8WTX9 485 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 HTR3CQ8WXA8 447 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 NKD1Q969G9 470 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 DDA1Q9BW61 102 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 CINPQ9BW66 212 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 SLC12A9Q9BXP2 914 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 ASPSCR1Q9BZE9 553 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 RDH14Q9HBH5 336 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 MOSPD1Q9UJG1 213 aa15.78■□□□□ 0.12
HERPUD1-215ENST00000568676 BOD1L1Q8NFC6 3051 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 IGHV5-10-1A0A0J9YXX1 117 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 WT1P19544 449 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 ALDH4A1P30038 563 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 ZNF135P52742 658 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 LIMK2P53671 638 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 NFKB2Q00653 900 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 TLE1Q04724 770 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 ACOX1Q15067 660 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 COLEC12Q5KU26 742 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 TMCO4Q5TGY1 634 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 PPP1R2P3Q6NXS1 205 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 NYAP1Q6ZVC0 841 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 MON1BQ7L1V2 547 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 IL22RA1Q8N6P7 574 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 OR4D9Q8NGE8 314 aa15.77■□□□□ 0.12
HERPUD1-215ENST00000568676 ZNF564Q8TBZ8 553 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms