RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 SPNS2Q8IVW8 549 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 APLFQ8IW19 511 aaPredicted RBP9.67□□□□□ -0.86
TCF4-240ENST00000568673 LGI2Q8N0V4 545 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 CFAP52Q8N1V2 620 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 GIPC2Q8TF65 315 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 MARK4Q96L34 752 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 CDK5RAP1Q96SZ6 601 aaKnown RBP9.67□□□□□ -0.86
TCF4-240ENST00000568673 MAGEH1Q9H213 219 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 ALG9Q9H6U8 611 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 ZDHHC7Q9NXF8 308 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 SCOCQ9UIL1 159 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 RIMKLBQ9ULI2 386 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 ARL5AQ9Y689 179 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 SLC38A8A6NNN8 435 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 NT5C1B-RDH14C9J2C7 533 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 H3BNX3 289 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 ACSL4O60488 711 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 SKAP2O75563 359 aaPredicted RBP9.67□□□□□ -0.86
TCF4-240ENST00000568673 RPP40O75818 363 aaKnown RBP9.67□□□□□ -0.86
TCF4-240ENST00000568673 GOT2P00505 430 aaKnown RBP9.67□□□□□ -0.86
TCF4-240ENST00000568673 GALTP07902 379 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 RAG1P15918 1043 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 FDXRP22570 491 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 ATP5C1P36542 298 aaKnown RBP9.67□□□□□ -0.86
TCF4-240ENST00000568673 GATMP50440 423 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 C1QTNF8P60827 252 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 XIAPP98170 497 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 NFKB2Q00653 900 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 ZNF549Q6P9A3 640 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 PIM3Q86V86 326 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 PDSS2Q86YH6 399 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 BBS5Q8N3I7 341 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 OR4L1Q8NH43 312 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 PXYLP1Q8TE99 480 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 PPP2R3CQ969Q6 453 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 L3HYPDHQ96EM0 354 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 DNAJC1Q96KC8 554 aaKnown RBP9.67□□□□□ -0.86
TCF4-240ENST00000568673 TTPALQ9BTX7 342 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 TTLL2Q9BWV7 592 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 KLHL4Q9C0H6 718 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 GSTO2Q9H4Y5 243 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 WDR41Q9HAD4 459 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 TNFRSF12AQ9NP84 129 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 DLGAP2Q9P1A6 1054 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 BCAP29Q9UHQ4 241 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 DNMT3LQ9UJW3 386 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 PACSIN3Q9UKS6 424 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 FIS1Q9Y3D6 152 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 TRAF6Q9Y4K3 522 aa9.67□□□□□ -0.86
TCF4-240ENST00000568673 CCDC162PA2VCL2 907 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 CASQ2O14958 399 aaPredicted RBP9.66□□□□□ -0.86
TCF4-240ENST00000568673 CFLARO15519 480 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 KIF1CO43896 1103 aaKnown RBP9.66□□□□□ -0.86
TCF4-240ENST00000568673 ENO3P13929 434 aaPredicted RBP9.66□□□□□ -0.86
TCF4-240ENST00000568673 ATF6P18850 670 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 HOXD9P28356 352 aaPredicted RBP9.66□□□□□ -0.86
TCF4-240ENST00000568673 SLC6A4P31645 630 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 SUOXP51687 545 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 THOP1P52888 689 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 INHBCP55103 352 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 TIAL1Q01085 375 aaKnown RBP eCLIP9.66□□□□□ -0.86
TCF4-240ENST00000568673 GNA12Q03113 381 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 GALNT3Q14435 633 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 PTPRCAPQ14761 206 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 ZNF678Q5SXM1 525 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 RPS27LQ71UM5 84 aaKnown RBP9.66□□□□□ -0.86
TCF4-240ENST00000568673 TAS1R1Q7RTX1 841 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 OR13C4Q8NGS5 318 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 SH3RF2Q8TEC5 729 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 PSKH2Q96QS6 385 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 TRIB3Q96RU7 358 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 MGME1Q9BQP7 344 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 POPDC3Q9HBV1 291 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 UTP6Q9NYH9 597 aaKnown RBP9.66□□□□□ -0.86
TCF4-240ENST00000568673 HCSTQ9UBK5 93 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 LRFN2Q9ULH4 789 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 UBFD1O14562 309 aaKnown RBP9.66□□□□□ -0.86
TCF4-240ENST00000568673 UBDO15205 165 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 TRPA1O75762 1119 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 SUPT7LO94864 414 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 NDST3O95803 873 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 LINGO3P0C6S8 592 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 CD1DP15813 335 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 OGNP20774 298 aaKnown RBP9.66□□□□□ -0.86
TCF4-240ENST00000568673 ME2P23368 584 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 SLC11A2P49281 568 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 CDH4P55283 916 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 STX5Q13190 355 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 CEACAM7Q14002 265 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 FLOT2Q14254 428 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 SEMA3AQ14563 771 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 LRRC36Q1X8D7 754 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 LPCAT4Q643R3 524 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 IL31Q6EBC2 164 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 TMEM173Q86WV6 379 aaPredicted RBP9.66□□□□□ -0.86
TCF4-240ENST00000568673 CRIPAKQ8N1N5 446 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 OR52K2Q8NGK3 314 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 RAET1EQ8TD07 263 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 GDPD5Q8WTR4 605 aa9.66□□□□□ -0.86
TCF4-240ENST00000568673 PTERQ96BW5 349 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms