RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	CDH19	Q9H159	772 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	EPN3	Q9H201	632 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	PDF	Q9HBH1	243 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	CYP4F12	Q9HCS2	524 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	KIAA1468	Q9P260	1216 aa		11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	NOCT	Q9UK39	431 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-238	ENST00000568169	IGHV5-10-1	A0A0J9YXX1	117 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169		F8VZ95	297 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	GADD45B	O75293	160 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	PRKCG	P05129	697 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	GP1BB	P13224	206 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	UCHL3	P15374	230 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	GM2A	P17900	193 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	CD1C	P29017	333 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	RFC1	P35251	1148 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	STAT1	P42224	750 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	CSNK1D	P48730	415 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	MAZ	P56270	477 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	POLE2	P56282	527 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	OR1D5	P58170	312 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	FOXK1	P85037	733 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	KCNAB2	Q13303	367 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	SKIDA1	Q1XH10	827 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	TSR1	Q2NL82	804 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	AMZ1	Q400G9	498 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	CFAP58	Q5T655	872 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	AFMID	Q63HM1	303 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	LIPI	Q6XZB0	460 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	SLFN11	Q7Z7L1	901 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	ZNF677	Q86XU0	584 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	GPBAR1	Q8TDU6	330 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	FAM172A	Q8WUF8	416 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	SLC20A1	Q8WUM9	679 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	PMEPA1	Q969W9	287 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	ECHDC3	Q96DC8	303 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	NUDT22	Q9BRQ3	303 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	C11orf70	Q9BRQ4	267 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	TUBGCP2	Q9BSJ2	902 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	LGR4	Q9BXB1	951 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	STK33	Q9BYT3	514 aa		11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	UBA2	Q9UBT2	640 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-238	ENST00000568169	CACNA1D	Q01668	2161 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	USP9X	Q93008	2570 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	PRSS38	A1L453	326 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	PDE2A	O00408	941 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	FGF1	P05230	155 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	KRT3	P12035	628 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	PRKCSH	P14314	528 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	CCNB1	P14635	433 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	LIF	P15018	202 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	CHRNB2	P17787	502 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	CR2	P20023	1033 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	ALDH4A1	P30038	563 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	UGT1A3	P35503	534 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	CASR	P41180	1078 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	CCR10	P46092	362 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	RGR	P47804	291 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	LIMK2	P53671	638 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	FMO1	Q01740	532 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	CDR2	Q01850	454 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	PTP4A2	Q12974	167 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	SQSTM1	Q13501	440 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	PNCK	Q6P2M8	343 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	WDR59	Q6PJI9	974 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	SRL	Q86TD4	932 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	NRROS	Q86YC3	692 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	FAM114A1	Q8IWE2	563 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	PELI3	Q8N2H9	469 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	IL22RA1	Q8N6P7	574 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	MLKL	Q8NB16	471 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	RCBTB1	Q8NDN9	531 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	SLC30A5	Q8TAD4	765 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	CCDC74B	Q96LY2	380 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	DDA1	Q9BW61	102 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	CATSPERB	Q9H7T0	1116 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	ANAPC2	Q9UJX6	822 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	B3GALT1	Q9Y5Z6	326 aa		11.41	□□□□□ -0.58
TCF4-238	ENST00000568169	COL12A1	Q99715	3063 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	NOTCH2	Q04721	2471 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	RHPN2P1	A8MT19	583 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169		J3KR12	359 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	ZW10	O43264	779 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	CREB3	O43889	395 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	PRAMEF11	O60813	436 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	FUCA1	P04066	466 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	ELFN1	P0C7U0	828 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	MYCLP1	P12525	358 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	GPD1	P21695	349 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	SERPINA4	P29622	427 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	GPR3	P46089	330 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	GSC	P56915	257 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	IGFBP7	Q16270	282 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	TPD52L1	Q16890	204 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	TRIM72	Q6ZMU5	477 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	DPPA4	Q7L190	304 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	CACNA2D3	Q8IZS8	1091 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	AGBL5	Q8NDL9	886 aa		11.4	□□□□□ -0.58
TCF4-238	ENST00000568169	OR4D9	Q8NGE8	314 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms