RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 NRSN2Q9GZP1 204 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 DEF6Q9H4E7 631 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 ABHD10Q9NUJ1 306 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 HAUS2Q9NVX0 235 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 KCTD5Q9NXV2 234 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 CTTNBP2NLQ9P2B4 639 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 SALL4Q9UJQ4 1053 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 PNMA8BQ9ULN7 279 aaPredicted RBP4.81□□□□□ -1.64
CLK3-219ENST00000567805 PHTF1Q9UMS5 762 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 COQ6Q9Y2Z9 468 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 GPSM3Q9Y4H4 160 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 U3KQA8 63 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 CHD6Q8TD26 2715 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 ATMQ13315 3056 aa4.81□□□□□ -1.64
CLK3-219ENST00000567805 RP1P56715 2156 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 TTC24A2A3L6 582 aaPredicted RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 EME2A4GXA9 379 aaPredicted RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 ZNF487B1APH4 448 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PSMD11O00231 422 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 CACNB4O00305 520 aaPredicted RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 TNFRSF10CO14798 259 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 MFSD11O43934 449 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 OPA1O60313 960 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 MFAP3LO75121 409 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 GCATO75600 419 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 RECQL5O94762 991 aaPredicted RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 RASGRP1O95267 797 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PGLSO95336 258 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 MT-CO3P00414 261 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 CPP00450 1065 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PRKCGP05129 697 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PCCBP05166 539 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ANXA6P08133 673 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 HOXC4P09017 264 aaPredicted RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 ALPIP09923 528 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 CYP2A6P11509 494 aaPredicted RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 MYF5P13349 255 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 CTSEP14091 401 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 TSHRP16473 764 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 MX2P20592 715 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 CES1P23141 567 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 KELP23276 732 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 CCNCP24863 283 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 VIPR1P32241 457 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 GJC1P36383 396 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 TRIM23P36406 574 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 GARSP41250 739 aaKnown RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 ARHGAP25P42331 645 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 HK3P52790 923 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ADKP55263 362 aaKnown RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 CLDN6P56747 220 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 KIAA1024LP59773 190 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 SRP54P61011 504 aaKnown RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 MAXP61244 160 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 SEMG2Q02383 582 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ACOX1Q15067 660 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ELOCQ15369 112 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 NR0B2Q15466 257 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 IFI16Q16666 785 aaKnown RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 CDKN3Q16667 212 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ALG11Q2TAA5 492 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 DEFB133Q30KQ1 61 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ATP13A4Q4VNC1 1196 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 C6orf132Q5T0Z8 1188 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ARMC12Q5T9G4 340 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 CDCP2Q5VXM1 449 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 NCBP2-AS2Q69YL0 99 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ALG1LQ6GMV1 187 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ESRP1Q6NXG1 681 aaKnown RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 GUSBP11Q6P575 273 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 LVRNQ6Q4G3 990 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 ENPP7Q6UWV6 458 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 KDM7AQ6ZMT4 941 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 USP45Q70EL2 814 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 VSIG1Q86XK7 387 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 GKN2Q86XP6 184 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 HID1Q8IV36 788 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 CNGA4Q8IV77 575 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 VSTM4Q8IW00 320 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 RHOT2Q8IXI1 618 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 RBFAQ8N0V3 343 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 NDUFAF2Q8N183 169 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PGBD5Q8N414 524 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 FSTL5Q8N475 847 aaPredicted RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 KCTD6Q8NC69 237 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PLA2G15Q8NCC3 412 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 TPCN2Q8NHX9 752 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PCDH19Q8TAB3 1148 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 WDR48Q8TAF3 677 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 PDCD6IPQ8WUM4 868 aaKnown RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 SCG3Q8WXD2 468 aaKnown RBP4.8□□□□□ -1.64
CLK3-219ENST00000567805 MAML1Q92585 1016 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 NAT6Q93015 286 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 GRAMD1AQ96CP6 724 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 FAF2Q96CS3 445 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 HDAC11Q96DB2 347 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 CCDC42Q96M95 316 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 COQ10AQ96MF6 247 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 NSMCE3Q96MG7 304 aa4.8□□□□□ -1.64
CLK3-219ENST00000567805 WDR92Q96MX6 357 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms