RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SPARCL1Q14515 664 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 SLC1A5Q15758 541 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 SIRPB2Q5JXA9 342 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 KCTD11Q693B1 232 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 NAPEPLDQ6IQ20 393 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 ZC3H14Q6PJT7 736 aaKnown RBP11.52□□□□□ -0.57
KARS-207ENST00000566560 LYPD8Q6UX82 237 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 SLC36A4Q6YBV0 504 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 CEP68Q76N32 757 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 DPPA4Q7L190 304 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 C11orf74Q86VG3 221 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 ABCA7Q8IZY2 2146 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 SLC25A41Q8N5S1 370 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 ZBTB44Q8NCP5 570 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 OR2T34Q8NGX1 318 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 MCCC1Q96RQ3 725 aaPredicted RBP11.52□□□□□ -0.57
KARS-207ENST00000566560 GPR174Q9BXC1 333 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 L2HGDHQ9H9P8 463 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 B4GALT6Q9UBX8 382 aa11.52□□□□□ -0.57
KARS-207ENST00000566560 TNRC6BQ9UPQ9 1833 aaKnown RBP11.51□□□□□ -0.57
KARS-207ENST00000566560 PLXNA2O75051 1894 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3DA0A087WVF3 549 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3IA0A087WXS9 549 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3EA0A087X179 549 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3KA0A087X1G2 549 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 LOC285095A0A1B0GVY8 99 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3FA6NER0 549 aaPredicted RBP11.51□□□□□ -0.57
KARS-207ENST00000566560 FAM187AA6NFU0 413 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 ANKRD66B4E2M5 251 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3LB9A6J9 549 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TSPAN6O43657 245 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 AGTP01019 485 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 SLC4A1P02730 911 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 ELFN1P0C7U0 828 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3HP0C7X1 549 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 PIRTP0C851 137 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 ITIH2P19823 946 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TPSB2P20231 275 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 VIPR1P32241 457 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 CNR2P34972 360 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 ADRA1AP35348 466 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 ADCY8P40145 1251 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TCF15Q12870 199 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 RALGDSQ12967 914 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 ARHGEF7Q14155 803 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 KCNJ11Q14654 390 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TPSAB1Q15661 275 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3GQ6DHY5 549 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3CQ6IPX1 549 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 KIAA1161Q6NSJ0 714 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 PPP1R21Q6ZMI0 780 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 MAATS1Q7Z4T9 603 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 LINC00523Q86TU6 105 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TBC1D3Q8IZP1 549 aaPredicted RBP11.51□□□□□ -0.57
KARS-207ENST00000566560 CXorf40AQ8TE69 158 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 SNX19Q92543 992 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 SCRN2Q96FV2 425 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 SMIM14Q96QK8 99 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 WRAP53Q9BUR4 548 aaKnown RBP11.51□□□□□ -0.57
KARS-207ENST00000566560 CARD6Q9BX69 1037 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 TRIM31Q9BZY9 425 aa11.51□□□□□ -0.57
KARS-207ENST00000566560 C6orf106Q9H6K1 298 aaPredicted RBP11.51□□□□□ -0.57
KARS-207ENST00000566560 DOCK9Q9BZ29 2069 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 SDK1Q7Z5N4 2213 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 C1orf232A0A0U1RR37 186 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 A0A1W2PQU0 124 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 MEI4A8MW99 385 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 EFCAB8A8MWE9 144 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 A8MX80 341 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 RNGTTO60942 597 aaKnown RBP11.5□□□□□ -0.57
KARS-207ENST00000566560 LILRB5O75023 590 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 TMEM63AO94886 807 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 SUN1O94901 812 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 HEXIM1O94992 359 aaKnown RBP11.5□□□□□ -0.57
KARS-207ENST00000566560 S1PR4O95977 384 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 C6P13671 934 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 LHCGRP22888 699 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 HNF1BP35680 557 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 ELF2Q15723 593 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 CNGA3Q16281 694 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 IZUMO3Q5VZ72 239 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 SEL1L3Q68CR1 1132 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 LRRC66Q68CR7 880 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 PMS2CLQ68D20 193 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 KIAA0895LQ68EN5 471 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 NEK5Q6P3R8 708 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 PRR23BQ6ZRT6 265 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 ARMCX6Q7L4S7 300 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 LPCAT2Q7L5N7 544 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 TSPAN33Q86UF1 283 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 TRIM69Q86WT6 500 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 HORMAD1Q86X24 394 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 NOA1Q8NC60 698 aaKnown RBP11.5□□□□□ -0.57
KARS-207ENST00000566560 BLOC1S5Q8TDH9 187 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 CPT1BQ92523 772 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 HSPA12BQ96MM6 686 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 LYSMD1Q96S90 227 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 RAB17Q9H0T7 212 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 PCED1AQ9H1Q7 454 aa11.5□□□□□ -0.57
KARS-207ENST00000566560 PIH1D1Q9NWS0 290 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms