RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 SPECC1LQ69YQ0 1117 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 ESRP1Q6NXG1 681 aaKnown RBP10.06□□□□□ -0.8
CMTM3-209ENST00000565003 BBS5Q8N3I7 341 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 ARL10Q8N8L6 244 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 KYQ8NBH2 561 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
CMTM3-209ENST00000565003 COQ10AQ96MF6 247 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 DNAJC7Q99615 494 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 LGR4Q9BXB1 951 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 FGF22Q9HCT0 170 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 NT5MQ9NPB1 228 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 MRPL40Q9NQ50 206 aaKnown RBP10.06□□□□□ -0.8
CMTM3-209ENST00000565003 CTTNBP2NLQ9P2B4 639 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 UVRAGQ9P2Y5 699 aa10.06□□□□□ -0.8
CMTM3-209ENST00000565003 ITPR1Q14643 2758 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 A0A0U1RQS6 177 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 A0A1W2PNU3 283 aaPredicted RBP10.05□□□□□ -0.8
CMTM3-209ENST00000565003 NPIPB15A6NHN6 443 aaPredicted RBP10.05□□□□□ -0.8
CMTM3-209ENST00000565003 CACNB4O00305 520 aaPredicted RBP10.05□□□□□ -0.8
CMTM3-209ENST00000565003 HEXIM1O94992 359 aaKnown RBP10.05□□□□□ -0.8
CMTM3-209ENST00000565003 PGLSO95336 258 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 TPM3P06753 285 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 ALPIP09923 528 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 H2AFZP0C0S5 128 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 CTSEP14091 401 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 VIPR1P32241 457 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 TRIM23P36406 574 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 ABCG1P45844 678 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 RPIAP49247 311 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 PDX1P52945 283 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 GABREP78334 506 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 IHHQ14623 411 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 ACOX1Q15067 660 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 PAFAH1B3Q15102 231 aaKnown RBP10.05□□□□□ -0.8
CMTM3-209ENST00000565003 ELOCQ15369 112 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 DENND2CQ68D51 928 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 PNCKQ6P2M8 343 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 LVRNQ6Q4G3 990 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 H2AFVQ71UI9 128 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 HSD11B1LQ7Z5J1 315 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 TSPAN33Q86UF1 283 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 TEX26Q8N6G2 289 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 PQLC3Q8N755 202 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 OR8K1Q8NGG5 319 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 OR56A4Q8NGH8 313 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 LRRN4Q8WUT4 740 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 NSMCE1Q8WV22 266 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 CTNNBL1Q8WYA6 563 aaPredicted RBP10.05□□□□□ -0.8
CMTM3-209ENST00000565003 OR1E3Q8WZA6 343 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 GLMNQ92990 594 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 NAT6Q93015 286 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 FAF2Q96CS3 445 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 NUS1Q96E22 293 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 SMIM14Q96QK8 99 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 MCCC1Q96RQ3 725 aaPredicted RBP10.05□□□□□ -0.8
CMTM3-209ENST00000565003 RBM15Q96T37 977 aaKnown RBP eCLIP10.05□□□□□ -0.8
CMTM3-209ENST00000565003 ZNF670Q9BS34 389 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 WDR26Q9H7D7 661 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 GULP1Q9UBP9 304 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 RABGEF1Q9UJ41 708 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 PADI4Q9UM07 663 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 GPR34Q9UPC5 381 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 DOLKQ9UPQ8 538 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 RAI2Q9Y5P3 530 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 DGKBQ9Y6T7 804 aa10.05□□□□□ -0.8
CMTM3-209ENST00000565003 PTPRQQ9UMZ3 2332 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 A0A1W2PQ67 120 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 SSU72P8A0A1W2PR75 194 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 PMS2P1A4D2B8 440 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 MFAP3LO75121 409 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 TNFP01375 233 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 PDHA1P08559 390 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 HOXC4P09017 264 aaPredicted RBP10.04□□□□□ -0.8
CMTM3-209ENST00000565003 TMEM253P0C7T8 217 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 CTPS1P17812 591 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 ACTN2P35609 894 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 ETV3P41162 512 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 DSC2Q02487 901 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 GBE1Q04446 702 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 SLC10A2Q12908 348 aaPredicted RBP10.04□□□□□ -0.8
CMTM3-209ENST00000565003 TRIM14Q14142 442 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 PDK2Q15119 407 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 ANKRD20A8PQ5CZ79 823 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 RALGPS1Q5JS13 557 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 ARMC12Q5T9G4 340 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 ALG1LQ6GMV1 187 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 RBM44Q6ZP01 1051 aaKnown RBP10.04□□□□□ -0.8
CMTM3-209ENST00000565003 GKN2Q86XP6 184 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 LRRC49Q8IUZ0 686 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 VSTM4Q8IW00 320 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 SFTPA2Q8IWL1 248 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 CBARPQ8N350 705 aaPredicted RBP10.04□□□□□ -0.8
CMTM3-209ENST00000565003 SDR16C5Q8N3Y7 309 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.04□□□□□ -0.8
CMTM3-209ENST00000565003 KCTD6Q8NC69 237 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 RNF214Q8ND24 703 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 ATL2Q8NHH9 583 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 CCL4L1Q8NHW4 92 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 TPCN2Q8NHX9 752 aa10.04□□□□□ -0.8
CMTM3-209ENST00000565003 PIH1D2Q8WWB5 315 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms