RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 HNRNPCL2B2RXH8 293 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 F5H423 210 aaPredicted RBP4.34□□□□□ -1.71
CHD9-212ENST00000564641 J3KR12 359 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 IPO5O00410 1097 aaKnown RBP4.34□□□□□ -1.71
CHD9-212ENST00000564641 SLC25A17O43808 307 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 MTA2O94776 668 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 NDUFB4O95168 129 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 GPTP24298 496 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 MCM3P25205 808 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 SSTR2P30874 369 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 HSPA1LP34931 641 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 ADD2P35612 726 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 SLC18A3Q16572 532 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 SYT16Q17RD7 645 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 TIGD6Q17RP2 521 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 TMEM95Q3KNT9 176 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 FAM83BQ5T0W9 1011 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 TRMT1LQ7Z2T5 733 aaKnown RBP4.34□□□□□ -1.71
CHD9-212ENST00000564641 CHD1LQ86WJ1 897 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 TMEM57Q8N5G2 664 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 RNFT2Q96EX2 444 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 CHODLQ9H9P2 273 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 KIF17Q9P2E2 1029 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 SIX4Q9UIU6 781 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 VDAC3Q9Y277 283 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 SNX9Q9Y5X1 595 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 ATXN2Q99700 1313 aaKnown RBP4.34□□□□□ -1.71
CHD9-212ENST00000564641 ZNF644Q9H582 1327 aaPredicted RBP4.34□□□□□ -1.71
CHD9-212ENST00000564641 MSH6P52701 1360 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 KIF15Q9NS87 1388 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 ERVK-7P63135 1459 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 RPRD2Q5VT52 1461 aaKnown RBP4.34□□□□□ -1.71
CHD9-212ENST00000564641 ABCC3O15438 1527 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 PRDM15P57071 1507 aaPredicted RBP4.34□□□□□ -1.71
CHD9-212ENST00000564641 DOCK7Q96N67 2140 aa4.34□□□□□ -1.71
CHD9-212ENST00000564641 CFAP65Q6ZU64 1925 aaKnown RBP4.33□□□□□ -1.72
CHD9-212ENST00000564641 MED1Q15648 1581 aaPredicted RBP4.33□□□□□ -1.72
CHD9-212ENST00000564641 NEURL4Q96JN8 1562 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 SLIT1O75093 1534 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 NKTRP30414 1462 aaKnown RBP4.33□□□□□ -1.72
CHD9-212ENST00000564641 hDV102S1A0JD36 115 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 TYW5A2RUC4 315 aaKnown RBP4.33□□□□□ -1.72
CHD9-212ENST00000564641 DHX16O60231 1041 aaKnown RBP4.33□□□□□ -1.72
CHD9-212ENST00000564641 TCEA3O75764 348 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 AFPP02771 609 aaKnown RBP4.33□□□□□ -1.72
CHD9-212ENST00000564641 PCNAP12004 261 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 CD58P19256 250 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 GLIPR1P48060 266 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 ACTR2P61160 394 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 PHEXP78562 749 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 CUL4BQ13620 913 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 PPP6R3Q5H9R7 873 aaPredicted RBP4.33□□□□□ -1.72
CHD9-212ENST00000564641 ZNF449Q6P9G9 518 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 ZC3HC1Q86WB0 502 aaKnown RBP4.33□□□□□ -1.72
CHD9-212ENST00000564641 SFR1Q86XK3 245 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 POF1BQ8WVV4 589 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 PPM1EQ8WY54 764 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 DUX3Q96PT4 197 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 CYSLTR2Q9NS75 346 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 GRHPRQ9UBQ7 328 aa4.33□□□□□ -1.72
CHD9-212ENST00000564641 EFCAB6Q5THR3 1501 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 FAM135BQ49AJ0 1406 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 NCOA3Q9Y6Q9 1424 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 TMEM2Q9UHN6 1383 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 ARHGAP10A1A4S6 786 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 HSPA12AO43301 675 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 ANP32CO43423 234 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 SRCP12931 536 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 PTPN2P17706 415 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 GM2AP17900 193 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 CHATP28329 748 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 NLRP5P59047 1200 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 YWHAZP63104 245 aaKnown RBP4.32□□□□□ -1.72
CHD9-212ENST00000564641 EDRF1Q3B7T1 1238 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 AMZ1Q400G9 498 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 ATP13A5Q4VNC0 1218 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 LNX1Q8TBB1 728 aaPredicted RBP4.32□□□□□ -1.72
CHD9-212ENST00000564641 ARRDC2Q8TBH0 407 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 MAGEC3Q8TD91 643 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 GDPD5Q8WTR4 605 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 TRAPPC12Q8WVT3 735 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 RASSF1Q9NS23 344 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 GDAQ9Y2T3 454 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 UBR1Q8IWV7 1749 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 CROCC2H7BZ55 1655 aa4.32□□□□□ -1.72
CHD9-212ENST00000564641 VWDEQ8N2E2 1590 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 LRRC7Q96NW7 1537 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 ARHGAP23Q9P227 1491 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 C17orf113A0A1B0GUU1 675 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 FAM72CH0Y354 149 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 RFPL2O75678 378 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 KDM4BO94953 1096 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 CLDN14O95500 239 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 CRYAAP02489 173 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 RYKP34925 604 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 ZNF132P52740 706 aa4.31□□□□□ -1.72
CHD9-212ENST00000564641 TBL3Q12788 808 aaKnown RBP4.31□□□□□ -1.72
CHD9-212ENST00000564641 ZNF155Q12901 538 aaPredicted RBP4.31□□□□□ -1.72
CHD9-212ENST00000564641 DMP1Q13316 513 aaPredicted RBP4.31□□□□□ -1.72
CHD9-212ENST00000564641 PRKG1Q13976 671 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms