RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TNFRSF12AQ9NP84 129 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 C8orf4Q9NR00 106 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 SFMBT1Q9UHJ3 866 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 MYRFQ9Y2G1 1151 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 RNF11Q9Y3C5 154 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 HNRNPRO43390 633 aaKnown RBP13.12□□□□□ -0.31
USB1-207ENST00000563149 B3GAT3O94766 335 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 SUPT7LO94864 414 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 ALDH3B2P48448 385 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 NAA20P61599 178 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 HERVK_113P63132 956 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 PRAMEP78395 509 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 ACVR1Q04771 509 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 BNIP2Q12982 314 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 GK3PQ14409 553 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 FSCN1Q16658 493 aaKnown RBP13.12□□□□□ -0.31
USB1-207ENST00000563149 PPP1R3AQ16821 1122 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 UGT3A2Q3SY77 523 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 COQ5Q5HYK3 327 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 C6orf10Q5SRN2 563 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 OVOS1Q6IE37 1185 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 MSANTD2Q6P1R3 559 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 C14orf80Q86SX3 495 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 LRRTM3Q86VH5 581 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 SPATA2LQ8IUW3 424 aaPredicted RBP13.12□□□□□ -0.31
USB1-207ENST00000563149 MINDY1Q8N5J2 469 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 TRIML2Q8N7C3 387 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 GPR150Q8NGU9 434 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 ANKRD49Q8WVL7 239 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 C19orf60Q96EN9 201 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 PAAF1Q9BRP4 392 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 GPATCH1Q9BRR8 931 aaKnown RBP13.12□□□□□ -0.31
USB1-207ENST00000563149 ERVK-6Q9BXR3 956 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 ANKRD60Q9BZ19 345 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 NOL6Q9H6R4 1146 aaKnown RBP13.12□□□□□ -0.31
USB1-207ENST00000563149 NT5MQ9NPB1 228 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 TMEM248Q9NWD8 314 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 ABCD2Q9UBJ2 740 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 TLR6Q9Y2C9 796 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 SNX13Q9Y5W8 968 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 AK5Q9Y6K8 562 aa13.12□□□□□ -0.31
USB1-207ENST00000563149 PTPRDP23468 1912 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 A0A1B0GVG6 124 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 H3BNH8 94 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 UBFD1O14562 309 aaKnown RBP13.11□□□□□ -0.31
USB1-207ENST00000563149 TRPA1O75762 1119 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 MATN4O95460 622 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 HSD17B1P14061 328 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 FDXRP22570 491 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 BRCC3P46736 316 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 SUOXP51687 545 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 FOXM1Q08050 763 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 BTG3Q14201 252 aaPredicted RBP13.11□□□□□ -0.31
USB1-207ENST00000563149 NRF1Q16656 503 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 INTS11Q5TA45 600 aaKnown RBP13.11□□□□□ -0.31
USB1-207ENST00000563149 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 HMBOX1Q6NT76 420 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 CD300LGQ6UXG3 332 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 ZBTB49Q6ZSB9 765 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 ERMP1Q7Z2K6 904 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 KDELC2Q7Z4H8 507 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 PTAR1Q7Z6K3 402 aaPredicted RBP13.11□□□□□ -0.31
USB1-207ENST00000563149 FUNDC1Q8IVP5 155 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 MFSD2AQ8NA29 543 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 OR10T2Q8NGX3 314 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 RHEBL1Q8TAI7 183 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 TSPEARQ8WU66 669 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 RSPH1Q8WYR4 309 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 GFM2Q969S9 779 aaKnown RBP13.11□□□□□ -0.31
USB1-207ENST00000563149 SLC39A13Q96H72 371 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 TCF12Q99081 682 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 CCT7Q99832 543 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 TMEM79Q9BSE2 394 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 ZYG11BQ9C0D3 744 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 ALG9Q9H6U8 611 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 PRDM5Q9NQX1 630 aaPredicted RBP13.11□□□□□ -0.31
USB1-207ENST00000563149 CCM2LQ9NUG4 571 aaPredicted RBP13.11□□□□□ -0.31
USB1-207ENST00000563149 GID8Q9NWU2 228 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 TUBA8Q9NY65 449 aaPredicted RBP13.11□□□□□ -0.31
USB1-207ENST00000563149 FLRT1Q9NZU1 646 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 MPP6Q9NZW5 540 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 RIMKLBQ9ULI2 386 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 CNOT6Q9ULM6 557 aaKnown RBP13.11□□□□□ -0.31
USB1-207ENST00000563149 SLC8A2Q9UPR5 921 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 PHF24Q9UPV7 400 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 CEPT1Q9Y6K0 416 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 NLRC5Q86WI3 1866 aa13.11□□□□□ -0.31
USB1-207ENST00000563149 MIA3Q5JRA6 1907 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 LOC285095A0A1B0GVY8 99 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 MSI1O43347 362 aaKnown RBP13.1□□□□□ -0.31
USB1-207ENST00000563149 HTRA2O43464 458 aaPredicted RBP13.1□□□□□ -0.31
USB1-207ENST00000563149 VPS4BO75351 444 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 MMP2P08253 660 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 CD1DP15813 335 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 GRIK1P39086 918 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 CD86P42081 329 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 SLC7A2P52569 658 aa13.1□□□□□ -0.31
USB1-207ENST00000563149 PLK1P53350 603 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms