RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 SCN8AQ9UQD0 1980 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 BSNQ9UPA5 3926 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TTC24A2A3L6 582 aaPredicted RBP16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CACNB4O00305 520 aaPredicted RBP16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 EFSO43281 561 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 NOBOXO60393 691 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 LRCH4O75427 683 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 HOXC4P09017 264 aaPredicted RBP16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 GLB1P16278 677 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SCNN1BP51168 640 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SLC10A7Q0GE19 358 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 DPYSQ14117 519 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ZSCAN23Q3MJ62 389 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CERCAMQ5T4B2 595 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 E4F1Q66K89 784 aaPredicted RBP16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PPP1R2P3Q6NXS1 205 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TAF8Q7Z7C8 310 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CCNJLQ8IV13 435 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 AOPEPQ8N6M6 819 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 Q8N9G6 341 aaPredicted RBP16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 FAM46DQ8NEK8 389 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 FNIP1Q8TF40 1166 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PSKH2Q96QS6 385 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 STRADBQ9C0K7 418 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 HAUS4Q9H6D7 363 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CWC15Q9P013 229 aaKnown RBP16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ATXN7L1Q9ULK2 861 aaPredicted RBP16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 RNF215Q9Y6U7 377 aa16.75■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CAPN8A6NHC0 703 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 B4DGG1 531 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TMX2-CTNND1H3BSU7 103 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TNFRSF10CO14798 259 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PRPSAP2O60256 369 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 RNF8O76064 485 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PEX11BO96011 259 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 HCAR3P49019 387 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 AP1S1P61966 158 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 POLR2LP62875 67 aaKnown RBP16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ZFP36L1Q07352 338 aaKnown RBP16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 HLTFQ14527 1009 aaKnown RBP eCLIP16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 LBRQ14739 615 aaKnown RBP16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 C14orf28Q4W4Y0 310 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PNCKQ6P2M8 343 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ZNF571Q7Z3V5 609 aaPredicted RBP16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TMPRSS9Q7Z410 1059 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SPRED1Q7Z699 444 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PSTKQ8IV42 348 aaKnown RBP16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SPOCK2Q92563 424 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 COQ10AQ96MF6 247 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TMEM74Q96NL1 305 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CCNL2Q96S94 520 aaPredicted RBP16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 WDR26Q9H7D7 661 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CYP4F12Q9HCS2 524 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 B4GALT6Q9UBX8 382 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SEPT3Q9UH03 358 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ACSL6Q9UKU0 697 aa16.74■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 FTLP02792 175 aaPredicted RBP16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TCF4P15884 667 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PNLIPP16233 465 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ITIH1P19827 911 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 KELP23276 732 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SRSF6Q13247 344 aaKnown RBP16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ACOX1Q15067 660 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TGIF1Q15583 401 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ASIC2Q16515 512 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 TMCO4Q5TGY1 634 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SPECC1LQ69YQ0 1117 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 JAMLQ86YT9 394 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PGBD5Q8N414 524 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PAF1Q8N7H5 531 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 DPEP2Q9H4A9 486 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 LRIT1Q9P2V4 623 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CNOT8Q9UFF9 292 aaKnown RBP16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PISDQ9UG56 409 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 LOXL2Q9Y4K0 774 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PCDHGC4Q9Y5F7 938 aa16.73■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PRSS38A1L453 326 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 AGRPO00253 132 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 DDX3XO00571 662 aaKnown RBP eCLIP16.72■□□□□ 0.272e-7■■■■■ 33.6
VPS9D1-AS1-201ENST00000562298 HTRA2O43464 458 aaPredicted RBP16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 FUCA1P04066 466 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 MYCLP1P12525 358 aaPredicted RBP16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 GZMAP12544 262 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CR2P20023 1033 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 IL1R2P27930 398 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 CNGA3Q16281 694 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 SLITRK4Q8IW52 837 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ZNF653Q96CK0 615 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 NUS1Q96E22 293 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ZNF599Q96NL3 588 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ZWILCHQ9H900 591 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 ETNK2Q9NVF9 386 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 MOSPD1Q9UJG1 213 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 PIEZO2Q9H5I5 2752 aa16.72■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 J3QKU1 62 aa16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 NVLO15381 856 aaKnown RBP16.71■□□□□ 0.27
VPS9D1-AS1-201ENST00000562298 NUDT21O43809 227 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms