RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 HNF1BP35680 557 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 CTSKP43235 329 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 STC1P52823 247 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 LIMK1P53667 647 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 PFN3P60673 137 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 PTSQ03393 145 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 LONRF2Q1L5Z9 754 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 PARP6Q2NL67 630 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 TRIM61Q5EBN2 209 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 TTC27Q6P3X3 843 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 CRTC1Q6UUV9 634 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 TECPR1Q7Z6L1 1165 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 ADAT2Q7Z6V5 191 aaKnown RBP13.46□□□□□ -0.25
CDH1-204ENST00000562118 NLRP8Q86W28 1048 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 CXorf40AQ8TE69 158 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 EID2BQ96D98 161 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 BMFQ96LC9 184 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 C19orf43Q9BQ61 176 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 ADGRE3Q9BY15 652 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 ZDHHC5Q9C0B5 715 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 MAGEE1Q9HCI5 957 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 KCTD5Q9NXV2 234 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 SLC6A14Q9UN76 642 aa13.46□□□□□ -0.25
CDH1-204ENST00000562118 AAR2Q9Y312 384 aaKnown RBP13.46□□□□□ -0.25
CDH1-204ENST00000562118 CTAGE9A4FU28 777 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 KHNYNO15037 678 aaKnown RBP13.45□□□□□ -0.26
CDH1-204ENST00000562118 ZNF185O15231 689 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 MMP20O60882 483 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 ALPIP09923 528 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 ELFN1P0C7U0 828 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 HLA-DPA1P20036 260 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 XPAP23025 273 aaPredicted RBP13.45□□□□□ -0.26
CDH1-204ENST00000562118 CD38P28907 300 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 MAT2AP31153 395 aaKnown RBP13.45□□□□□ -0.26
CDH1-204ENST00000562118 IGFALSP35858 605 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 GEMP55040 296 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 IRX4P78413 519 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 DPTQ07507 201 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 PTPRRQ15256 657 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 SLC1A5Q15758 541 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 TCEAL6Q6IPX3 200 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 DENND5AQ6IQ26 1287 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 ESRP1Q6NXG1 681 aaKnown RBP13.45□□□□□ -0.26
CDH1-204ENST00000562118 ZNF765Q7L2R6 523 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 TSPAN33Q86UF1 283 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 RGL4Q8IZJ4 473 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 NDUFAF2Q8N183 169 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 GLIS1Q8NBF1 620 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 PDCD6IPQ8WUM4 868 aaKnown RBP13.45□□□□□ -0.26
CDH1-204ENST00000562118 SLCO2A1Q92959 643 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 TCEAL3Q969E4 200 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 DTD2Q96FN9 168 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 SERAC1Q96JX3 654 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 SMIM14Q96QK8 99 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 SRPK1Q96SB4 655 aaKnown RBP13.45□□□□□ -0.26
CDH1-204ENST00000562118 WRAP53Q9BUR4 548 aaKnown RBP13.45□□□□□ -0.26
CDH1-204ENST00000562118 SMOC1Q9H4F8 434 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 ERVMER34-1Q9H9K5 563 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 SAR1BQ9Y6B6 198 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 KNL1Q8NG31 2342 aa13.45□□□□□ -0.26
CDH1-204ENST00000562118 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 PTPRZ1P23471 2315 aaPredicted RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 RGSL1A5PLK6 1076 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 ERI2A8K979 691 aaKnown RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 NEMP1O14524 444 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 ARHGAP33O14559 1287 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 CDX4O14627 284 aaPredicted RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 PMPCBO75439 489 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 SUN1O94901 812 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 PAK4O96013 591 aaPredicted RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 FGF1P05230 155 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 HOXC4P09017 264 aaPredicted RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 C1SP09871 688 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 ZNF883P0CG24 379 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 AKT2P31751 481 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 TRIM23P36406 574 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 FNTAP49354 379 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 NXPH1P58417 271 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 FAM193AP78312 1265 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 GRIK2Q13002 908 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 SEMA5AQ13591 1074 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 SF3A2Q15428 464 aaKnown RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 ZNF423Q2M1K9 1284 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 WSCD2Q2TBF2 565 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 SIRPB2Q5JXA9 342 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 LRRC66Q68CR7 880 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 C4orf22Q6V702 233 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 TMC3Q7Z5M5 1100 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 SLC22A18ASQ8N1D0 253 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 LPCAT1Q8NF37 534 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 DTX3LQ8TDB6 740 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 SNX19Q92543 992 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 C1QTNF7Q9BXJ2 289 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 RXFP3Q9NSD7 469 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 DNAAF2Q9NVR5 837 aaKnown RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 UBP1Q9NZI7 540 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 RNF14Q9UBS8 474 aa13.44□□□□□ -0.26
CDH1-204ENST00000562118 FEZ2Q9UHY8 353 aaPredicted RBP13.44□□□□□ -0.26
CDH1-204ENST00000562118 PLXNB3Q9ULL4 1909 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms