RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 LMO7DNF2Z398 122 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 TPP1O14773 563 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 LZTS3O60299 673 aaPredicted RBP16.02■□□□□ 0.16
LMX1B-204ENST00000561065 BRINP1O60477 761 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 SOCS5O75159 536 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 MAP3K6O95382 1288 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 ELFN1P0C7U0 828 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 TGM2P21980 687 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 LHCGRP22888 699 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 MAGEA1P43355 309 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 PEX5P50542 639 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 ZNF75DP51815 510 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 HK3P52790 923 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 PPARDQ03181 441 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 MTM1Q13496 603 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 IHHQ14623 411 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 CNGA3Q16281 694 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 C6orf132Q5T0Z8 1188 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 FAXCQ5TGI0 409 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 CRTC1Q6UUV9 634 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 EFL1Q7Z2Z2 1120 aaKnown RBP16.02■□□□□ 0.16
LMX1B-204ENST00000561065 PCDH19Q8TAB3 1148 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 HNRNPLLQ8WVV9 542 aaKnown RBP16.02■□□□□ 0.16
LMX1B-204ENST00000561065 NUDCD1Q96RS6 583 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 IL12RB2Q99665 862 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 RBSNQ9H1K0 784 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 NOD2Q9HC29 1040 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 SALL4Q9UJQ4 1053 aa16.02■□□□□ 0.16
LMX1B-204ENST00000561065 EME2A4GXA9 379 aaPredicted RBP16.01■□□□□ 0.15
LMX1B-204ENST00000561065 CFAP69A5D8W1 941 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 YY2O15391 372 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 MTA2O94776 668 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 MMP13P45452 471 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 NOP2P46087 812 aaKnown RBP16.01■□□□□ 0.15
LMX1B-204ENST00000561065 MESDQ14696 234 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 ENPP7Q6UWV6 458 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 HID1Q8IV36 788 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 KYQ8NBH2 561 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 LRRN4Q8WUT4 740 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 OR1E3Q8WZA6 343 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 COQ10AQ96MF6 247 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 ZNF830Q96NB3 372 aaPredicted RBP16.01■□□□□ 0.15
LMX1B-204ENST00000561065 SMIM14Q96QK8 99 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 SLC13A1Q9BZW2 595 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 FGF22Q9HCT0 170 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 SCUBE2Q9NQ36 999 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 SPTLC3Q9NUV7 552 aa16.01■□□□□ 0.15
LMX1B-204ENST00000561065 ARHGEF17Q96PE2 2063 aaPredicted RBP16.01■□□□□ 0.15
LMX1B-204ENST00000561065 PTPRQQ9UMZ3 2332 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 A0A0U1RQS6 177 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 A0A1W2PNU3 283 aaPredicted RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 CPED1A4D0V7 1026 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 TMEM202A6NGA9 273 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 CSO75390 466 aaKnown RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 CPP00450 1065 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 KRT10P13645 584 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 MX2P20592 715 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 CES1P23141 567 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 DUSP3P51452 185 aaPredicted RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 KIAA1024LP59773 190 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 GALNT2Q10471 571 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 PAFAH1B3Q15102 231 aaKnown RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 TCEAL1Q15170 157 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 NR0B2Q15466 257 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 RALGPS1Q5JS13 557 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 LRRC38Q5VT99 294 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 TIGD7Q6NT04 549 aaPredicted RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 TEX26Q8N6G2 289 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 PQLC3Q8N755 202 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 TC2NQ8N9U0 490 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 MAPK15Q8TD08 544 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 TRAF3IP1Q8TDR0 691 aaPredicted RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 PDCD6IPQ8WUM4 868 aaKnown RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 FAF2Q96CS3 445 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 WDR92Q96MX6 357 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 DCBLD2Q96PD2 775 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 ZNF670Q9BS34 389 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 LGR4Q9BXB1 951 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 MRPL40Q9NQ50 206 aaKnown RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 DDX56Q9NY93 547 aaKnown RBP16■□□□□ 0.15
LMX1B-204ENST00000561065 KLQ9UEF7 1012 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16■□□□□ 0.15
LMX1B-204ENST00000561065 AK5Q9Y6K8 562 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 BPTFQ12830 3046 aa16■□□□□ 0.15
LMX1B-204ENST00000561065 NPIPB15A6NHN6 443 aaPredicted RBP15.99■□□□□ 0.15
LMX1B-204ENST00000561065 TMEM110-MUSTN1A8MSY1 372 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 HEXIM1O94992 359 aaKnown RBP15.99■□□□□ 0.15
LMX1B-204ENST00000561065 RASGRP1O95267 797 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 ANXA6P08133 673 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 ZFXP17010 805 aaPredicted RBP15.99■□□□□ 0.15
LMX1B-204ENST00000561065 ITPKBP27987 946 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 GARSP41250 739 aaKnown RBP15.99■□□□□ 0.15
LMX1B-204ENST00000561065 PDX1P52945 283 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 SRP54P61011 504 aaKnown RBP15.99■□□□□ 0.15
LMX1B-204ENST00000561065 ANKRD20A8PQ5CZ79 823 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 MARC1Q5VT66 337 aa15.99■□□□□ 0.15
LMX1B-204ENST00000561065 ESRP1Q6NXG1 681 aaKnown RBP15.99■□□□□ 0.15
LMX1B-204ENST00000561065 BZW1Q7L1Q6 419 aaKnown RBP15.99■□□□□ 0.15
LMX1B-204ENST00000561065 RD3Q7Z3Z2 195 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms