RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 DCP2Q8IU60 420 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-213ENST00000560856 NAXDQ8IW45 347 aa15.32■□□□□ 0.04
SNRPA1-213ENST00000560856 UBL4BQ8N7F7 174 aa15.32■□□□□ 0.04
SNRPA1-213ENST00000560856 TRIB3Q96RU7 358 aa15.32■□□□□ 0.04
SNRPA1-213ENST00000560856 C10orf88Q9H8K7 445 aa15.32■□□□□ 0.04
SNRPA1-213ENST00000560856 HAUS2Q9NVX0 235 aa15.32■□□□□ 0.04
SNRPA1-213ENST00000560856 SEPT10Q9P0V9 454 aa15.32■□□□□ 0.04
SNRPA1-213ENST00000560856 PCOLCE2Q9UKZ9 415 aa15.32■□□□□ 0.04
SNRPA1-213ENST00000560856 LZTS3O60299 673 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 NEBLO76041 1014 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 ALPIP09923 528 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 ELFN1P0C7U0 828 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 HNF1BP35680 557 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 RPL26P61254 145 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 KLF1Q13351 362 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 SLC14A2Q15849 920 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 N4BP2L1Q5TBK1 243 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 HSD11B1LQ7Z5J1 315 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 GATAD2AQ86YP4 633 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 ZNF567Q8N184 647 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 PELI3Q8N2H9 469 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 OXR1Q8N573 874 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 PAF1Q8N7H5 531 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 PLA2G15Q8NCC3 412 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 SPATA22Q8NHS9 363 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 HTR3CQ8WXA8 447 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 IFT43Q96FT9 208 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 PDLIM2Q96JY6 352 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 RBM15Q96T37 977 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 C1QTNF7Q9BXJ2 289 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 PCDH9Q9HC56 1237 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 KLF15Q9UIH9 416 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 PNMA8BQ9ULN7 279 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 RPL26L1Q9UNX3 145 aaKnown RBP15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 PPP2R2CQ9Y2T4 447 aa15.31■□□□□ 0.04
SNRPA1-213ENST00000560856 TCRBV7S2A1N4TA0A589 114 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 YKT6O15498 198 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 FLRT2O43155 660 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 MTSS1O43312 755 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 CYP2A6P11509 494 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 RBL1P28749 1068 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 ARRB1P49407 418 aaPredicted RBP15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 YPEL5P62699 121 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 EIF2B5Q13144 721 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 SUZ12Q15022 739 aaKnown RBP15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 CDKN3Q16667 212 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 QPCTQ16769 361 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 MEI1Q5TIA1 1274 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 CRTC1Q6UUV9 634 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 RFLNAQ6ZTI6 216 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 TECPR1Q7Z6L1 1165 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 SLC25A45Q8N413 288 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 LYSMD1Q96S90 227 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 FAM118BQ9BPY3 351 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 KCNF1Q9H3M0 494 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 SLC32A1Q9H598 525 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 USP29Q9HBJ7 922 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 LZTFL1Q9NQ48 299 aa15.3■□□□□ 0.04
SNRPA1-213ENST00000560856 TDRD6O60522 2096 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 SPAARA0A1B0GVQ0 90 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 ANKRD66B4E2M5 251 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 H7C0C1 242 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 PSMD11O00231 422 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 TOR1BO14657 336 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 TJP3O95049 919 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 MT-CYBP00156 380 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 NFKB1P19838 968 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 TRIM23P36406 574 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 CETN2P41208 172 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 GRK6P43250 576 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 ATP5OP48047 213 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 EIF3EP60228 445 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 PTSQ03393 145 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 MTM1Q13496 603 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 PDE1CQ14123 709 aaPredicted RBP15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 INPP5AQ14642 412 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 ZNF542PQ5EBM4 170 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 KDELC1Q6UW63 502 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 Q6ZVL8 140 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 USP45Q70EL2 814 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 GLRX5Q86SX6 157 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 RHBDD1Q8TEB9 315 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 SETD7Q8WTS6 366 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 FUBP1Q96AE4 644 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 DTD2Q96FN9 168 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 VAT1Q99536 393 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 APOOQ9BUR5 198 aa15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 R3HDM2Q9Y2K5 976 aaKnown RBP15.29■□□□□ 0.04
SNRPA1-213ENST00000560856 GOLGA4Q13439 2230 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 CAPN8A6NHC0 703 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 GOLGA8CPA6NN73 597 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 K7ESM1 405 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 PIAS2O75928 621 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 CSF2P04141 144 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 ITGAVP06756 1048 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 ADRB1P08588 477 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 C1SP09871 688 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 GIMD1P0DJR0 217 aa15.28■□□□□ 0.04
SNRPA1-213ENST00000560856 RBP3P10745 1247 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms