RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 KHDRBS3O75525 346 aaKnown RBP12.68□□□□□ -0.38
SYNM-203ENST00000560674 SERPINB7O75635 380 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 NADKO95544 446 aaPredicted RBP12.68□□□□□ -0.38
SYNM-203ENST00000560674 NELFEP18615 380 aaKnown RBP12.68□□□□□ -0.38
SYNM-203ENST00000560674 RPL4P36578 427 aaKnown RBP12.68□□□□□ -0.38
SYNM-203ENST00000560674 MRPS5P82675 430 aaKnown RBP12.68□□□□□ -0.38
SYNM-203ENST00000560674 PCBP1Q15365 356 aaKnown RBP eCLIP12.68□□□□□ -0.38
SYNM-203ENST00000560674 LPCAT4Q643R3 524 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.68□□□□□ -0.38
SYNM-203ENST00000560674 IQCKQ8N0W5 287 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 FAM13CQ8NE31 585 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 FAM81AQ8TBF8 368 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 HDAC10Q969S8 669 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 BCL2L14Q9BZR8 327 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 CAB39LQ9H9S4 337 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 C8orf4Q9NR00 106 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 MRPL17Q9NRX2 175 aaKnown RBP12.68□□□□□ -0.38
SYNM-203ENST00000560674 FGF1P05230 155 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 CRHR1P34998 444 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 GALNT3Q14435 633 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 CPSF6Q16630 551 aaKnown RBP eCLIP12.68□□□□□ -0.38
SYNM-203ENST00000560674 AKIRIN2Q53H80 203 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 SPACA7Q96KW9 195 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 TM6SF2Q9BZW4 377 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 RHOJQ9H4E5 214 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 LRIG2O94898 1065 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 CYP4B1P13584 511 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 MAXP61244 160 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 CDK18Q07002 472 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 FKBP1CQ5VVH2 108 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 CNSTQ6PJW8 725 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 RIOX2Q8IUF8 465 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 DENND1CQ8IV53 801 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 PARP8Q8N3A8 854 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 COX4I2Q96KJ9 171 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 PLLPQ9Y342 182 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 HES2Q9Y543 173 aa12.68□□□□□ -0.38
SYNM-203ENST00000560674 A0A0J9YYE9 177 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 AP3D1O14617 1153 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 TEX28O15482 410 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 ZW10O43264 779 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 LCA5LO95447 670 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 CCNYL3P0C7X3 344 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 TGFBR2P37173 567 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 AIF1P55008 147 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 TIGD2Q4W5G0 525 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 IRAK1BP1Q5VVH5 260 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 RAET1GQ6H3X3 334 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 GALNT18Q6P9A2 607 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 PTCHD4Q6ZW05 846 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 ZBTB46Q86UZ6 589 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 SLC44A1Q8WWI5 657 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 ZNF607Q96SK3 696 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 TMPRSS4Q9NRS4 437 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 ZNHIT2Q9UHR6 403 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 IFT172Q9UG01 1749 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 ROBO3Q96MS0 1386 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 TBL1XO60907 577 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 TIPRLO75663 272 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 LRATO95237 230 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 PIRTP0C851 137 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 NR2F6P10588 404 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 GPR1P46091 355 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 KLF10Q13118 480 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 MFSD5Q6N075 450 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 SPATA19Q7Z5L4 167 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 CLNKQ7Z7G1 428 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 RASAL3Q86YV0 1011 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 VGLL2Q8N8G2 317 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 OR2T12Q8NG77 320 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 ZFYVE1Q9HBF4 777 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 PCDH18Q9HCL0 1135 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 PTCH2Q9Y6C5 1203 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 DDX3YO15523 660 aaKnown RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 S100A9P06702 114 aaKnown RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 LSM12Q3MHD2 195 aaKnown RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 GK5Q6ZS86 529 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 METTL3Q86U44 580 aaKnown RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 P2RY11Q96G91 374 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 MFSD14AQ96MC6 490 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 TEFMQ96QE5 360 aaKnown RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 NOL11Q9H8H0 719 aaKnown RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 NEK6Q9HC98 313 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 ERVK-5Q9HDB9 667 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 UGT2B11O75310 529 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 FARP2O94887 1054 aaPredicted RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 ZBTB11O95625 1053 aaPredicted RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 SLC6A2P23975 617 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 BEX3Q00994 111 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 PSMD5Q16401 504 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 DEF8Q6ZN54 512 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 SLCO6A1Q86UG4 719 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 BRD9Q9H8M2 597 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 GALNT8Q9NY28 637 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 ATXN10Q9UBB4 475 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 SAMD4AQ9UPU9 718 aaKnown RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 WBP11Q9Y2W2 641 aaKnown RBP12.67□□□□□ -0.38
SYNM-203ENST00000560674 PXDNQ92626 1479 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 TMEM131LA2VDJ0 1609 aa12.67□□□□□ -0.38
SYNM-203ENST00000560674 TRAV19A0A0A6YYK7 116 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms