RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 FAM92AA1XBS5 289 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 BTN3A3O00478 584 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 OR10H2O60403 315 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 GNRH1P01148 92 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 GPR1P46091 355 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 MED22Q15528 200 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 BMT2Q1RMZ1 405 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 FAM47BQ8NA70 645 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 HJURPQ8NCD3 748 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 OR4L1Q8NH43 312 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 CSGALNACT1Q8TDX6 532 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 CLP1Q92989 425 aaKnown RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 NDNQ99608 321 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 PRDM4Q9UKN5 801 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 DIP2CQ9Y2E4 1556 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 TBC1D3BA6NDS4 549 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 DHX15O43143 795 aaKnown RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 UBA1P22314 1058 aaKnown RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 PSMD5Q16401 504 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 CPSF6Q16630 551 aaKnown RBP eCLIP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 MFSD5Q6N075 450 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 PTCHD4Q6ZW05 846 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 SAPCD2Q86UD0 394 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 C10orf107Q8IVU9 208 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 PHC3Q8NDX5 983 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 TRPV3Q8NET8 790 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 TIFAQ96CG3 184 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 CXorf40BQ96DE9 158 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 TIMMDC1Q9NPL8 285 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 A0A1W2PRG6 482 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 BUD23O43709 281 aaKnown RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 CDC25CP30307 473 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 CASP5P51878 434 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 ARHGDIBP52566 201 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 TDRD1Q9BXT4 1180 aaKnown RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 TRAV19A0A0A6YYK7 116 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 A8MX80 341 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 G3V2T6 193 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 KHDRBS3O75525 346 aaKnown RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 S100A1P23297 94 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 CNTN2Q02246 1040 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 RGS1Q08116 209 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 OR52K2Q8NGK3 314 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 HM13Q8TCT9 377 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 BTBD9Q96Q07 612 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 C3orf14Q9HBI5 128 aa13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 MRPL17Q9NRX2 175 aaKnown RBP13.23□□□□□ -0.29
CSPG4P11-201ENST00000560634 ATP6AP2A0A1C7CYW4 349 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 PRR5-ARHGAP8B1AHC4 643 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 TISP43B9A030 160 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 GSC2O15499 205 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLC25A12O75746 678 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 ATP6AP2O75787 350 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 HNRNPLP14866 589 aaKnown RBP eCLIP13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 AMD1P17707 334 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 HDCP19113 662 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 ARHGAP8P85298 464 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 CREMQ03060 361 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 KLF10Q13118 480 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 KLHL23Q8NBE8 558 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 PIK3C3Q8NEB9 887 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 HDAC10Q969S8 669 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 GORASP1Q9BQQ3 440 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 CDT1Q9H211 546 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 EXD2Q9NVH0 621 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 RCOR3Q9P2K3 495 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 OGDHLQ9ULD0 1010 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 SAGE2PA6NJ88 616 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 H3BNH8 94 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 MYBL2P10244 700 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 GOT1P17174 413 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 MARCKSL1P49006 195 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 SCNN1GP51170 649 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 WNT3AP56704 352 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 ABATP80404 500 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 TIGD2Q4W5G0 525 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 IRF2BP2Q7Z5L9 587 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 TNS4Q8IZW8 715 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 TRPV1Q8NER1 839 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 PPCDCQ96CD2 204 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLC47A1Q96FL8 570 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 RSPH9Q9H1X1 276 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 UBIAD1Q9Y5Z9 338 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 FAM86C2PA6NEL3 165 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 ARHGEF33A8MVX0 844 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 LOC110117498-PIK3R3F6TDL0 507 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 MDM4O15151 490 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 ADSLP30566 484 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 CRHR1P34998 444 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 FCHO2Q0JRZ9 810 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 CTBP1Q13363 440 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 CELF3Q5SZQ8 465 aaKnown RBP13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 OLFML1Q6UWY5 402 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 STRADAQ7RTN6 431 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 CUZD1Q86UP6 607 aa13.22□□□□□ -0.29
CSPG4P11-201ENST00000560634 C12orf56Q8IXR9 622 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms