RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TBC1D30Q9Y2I9 924 aa9.74□□□□□ -0.85
RTF1-206ENST00000560447 SCN5AQ14524 2016 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 OBSL1O75147 1896 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 ZNF840PA6NDX5 716 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 A8MT66 165 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 H3BNC9 293 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 CD3EAPO15446 510 aaKnown RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 SMIM24O75264 130 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ABLIM3O94929 683 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 TBX18O95935 607 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 CR2P20023 1033 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 IMPDH1P20839 514 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 SAT1P21673 171 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 MPSTP25325 297 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 PIK3R1P27986 724 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ABCG1P45844 678 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 CPA2P48052 419 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ALDH7A1P49419 539 aaKnown RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 MTTPP55157 894 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ARPP19P56211 112 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ATP6V0D1P61421 351 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 CREMQ03060 361 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ZNF177Q13360 481 aaPredicted RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 VEPH1Q14D04 833 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 TAF1AQ15573 450 aaPredicted RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 MUM1Q2TAK8 710 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 LSM12Q3MHD2 195 aaKnown RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 INO80DQ53TQ3 878 aaPredicted RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 C1orf146Q5VVC0 180 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 AFTPHQ6ULP2 937 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 RIPOR1Q6ZS17 1223 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 FRMD7Q6ZUT3 714 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ANKRD33Q7Z3H0 272 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 RAB44Q7Z6P3 723 aaPredicted RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 TMEM126BQ8IUX1 230 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 FBXW8Q8N3Y1 598 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 OR6P1Q8NGX9 317 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 OR4L1Q8NH43 312 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ZNF461Q8TAF7 563 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 WDR60Q8WVS4 1066 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 HDAC10Q969S8 669 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ZNF333Q96JL9 665 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ZNF570Q96NI8 536 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 TOX2Q96NM4 488 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 KLHL5Q96PQ7 755 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 PANX3Q96QZ0 392 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 CINPQ9BW66 212 aaPredicted RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 PRR14Q9BWN1 585 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 CRISPLD1Q9H336 500 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ATXN3LQ9H3M9 355 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 POMKQ9H5K3 350 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 TFB2MQ9H5Q4 396 aaKnown RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 MEAF6Q9HAF1 191 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 GPBP1L1Q9HC44 474 aaPredicted RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 CATSPERZQ9NTU4 200 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 UTP6Q9NYH9 597 aaKnown RBP9.73□□□□□ -0.85
RTF1-206ENST00000560447 ZDHHC2Q9UIJ5 367 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 SSX2IPQ9Y2D8 614 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 LRCH1Q9Y2L9 728 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 SLC27A5Q9Y2P5 690 aa9.73□□□□□ -0.85
RTF1-206ENST00000560447 ZNF106Q9H2Y7 1883 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 DENND4CQ5VZ89 1909 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 CCDC78A2IDD5 438 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 C2orf81A6NN90 581 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 H7C0S8 307 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 SDHDO14521 159 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 INSIG1O15503 277 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 DCXO43602 365 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 ZBTB14O43829 449 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 TBX10O75333 385 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 TRPA1O75762 1119 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 KRT36O76013 467 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 SOD2P04179 222 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 CHRNGP07510 517 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 RHOCP08134 193 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 FGF4P08620 206 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 CCDC166P0CW27 439 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 HMGA1P17096 107 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 ITGAXP20702 1163 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 SP100P23497 879 aaPredicted RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 ACVRL1P37023 503 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 AVPR1AP37288 418 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 GLRBP48167 497 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 CLCN4P51793 760 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 ZNF140P52738 457 aaPredicted RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 STC1P52823 247 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 MAXP61244 160 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 MRPS35P82673 323 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 PLD1Q13393 1074 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 CUL3Q13618 768 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 CYLC2Q14093 348 aaPredicted RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 CSHL1Q14406 222 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 GSTA3Q16772 222 aa9.72□□□□□ -0.85
RTF1-206ENST00000560447 AARS2Q5JTZ9 985 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 RBM20Q5T481 1227 aaKnown RBP9.72□□□□□ -0.85
RTF1-206ENST00000560447 ADGRF1Q5T601 910 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms