RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 ALPIP09923 528 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 ELFN1P0C7U0 828 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 BCKDHBP21953 392 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 CHRNA4P43681 627 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 NPY2RP49146 381 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 LIG3P49916 1009 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 DRG2P55039 364 aaKnown RBP12.29□□□□□ -0.44
USP8-209ENST00000560297 PDE1BQ01064 536 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 TCF15Q12870 199 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 LAMB3Q13751 1172 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 SIM2Q14190 667 aaPredicted RBP12.29□□□□□ -0.44
USP8-209ENST00000560297 MORF4L2Q15014 288 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 PLK5Q496M5 336 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 TMEM259Q4ZIN3 620 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 WDR45BQ5MNZ6 344 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 RNASEH2BQ5TBB1 312 aaKnown RBP12.29□□□□□ -0.44
USP8-209ENST00000560297 DUPD1Q68J44 220 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 LRRC8BQ6P9F7 803 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 OR52K1Q8NGK4 314 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 TRIM51Q9BSJ1 452 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 LRRC1Q9BTT6 524 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 C1QTNF7Q9BXJ2 289 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 C1QTNF2Q9BXJ5 285 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 SLC17A9Q9BYT1 436 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 FRMD8Q9BZ67 464 aaPredicted RBP12.29□□□□□ -0.44
USP8-209ENST00000560297 GPR63Q9BZJ6 419 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 SEMA4AQ9H3S1 761 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 C6orf106Q9H6K1 298 aaPredicted RBP12.29□□□□□ -0.44
USP8-209ENST00000560297 ZFYVE1Q9HBF4 777 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 CASS4Q9NQ75 786 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 ZFR2Q9UPR6 939 aaKnown RBP12.29□□□□□ -0.44
USP8-209ENST00000560297 DMTF1Q9Y222 760 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 ITM2BQ9Y287 266 aa12.29□□□□□ -0.44
USP8-209ENST00000560297 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 C1orf232A0A0U1RR37 186 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 RGSL1A5PLK6 1076 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 C2orf81A6NN90 581 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 LZTS3O60299 673 aaPredicted RBP12.28□□□□□ -0.44
USP8-209ENST00000560297 FSBPO95073 299 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 CLDN7O95471 211 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 CRTAMO95727 393 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 MLNP12872 115 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 C6P13671 934 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 DPP6P42658 865 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 CREB5Q02930 508 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 PTSQ03393 145 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 RALGDSQ12967 914 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 CALCOCO2Q13137 446 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 SRSF5Q13243 272 aaKnown RBP12.28□□□□□ -0.44
USP8-209ENST00000560297 OLIG2Q13516 323 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 AGERQ15109 404 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 TAF1AQ15573 450 aaPredicted RBP12.28□□□□□ -0.44
USP8-209ENST00000560297 CNGA3Q16281 694 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 CDKN3Q16667 212 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 ZNF284Q2VY69 593 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 SETMARQ53H47 684 aaPredicted RBP12.28□□□□□ -0.44
USP8-209ENST00000560297 IZUMO3Q5VZ72 239 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 ARMC3Q5W041 872 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 LRRC66Q68CR7 880 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 PMS2CLQ68D20 193 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 TMC3Q7Z5M5 1100 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 TMEFF1Q8IYR6 380 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 NAT8LQ8N9F0 302 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 NOA1Q8NC60 698 aaKnown RBP12.28□□□□□ -0.44
USP8-209ENST00000560297 PRSS33Q8NF86 280 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 BLOC1S5Q8TDH9 187 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 DNASE2BQ8WZ79 361 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 BIRC7Q96CA5 298 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 LENG8Q96PV6 779 aaPredicted RBP12.28□□□□□ -0.44
USP8-209ENST00000560297 C19orf43Q9BQ61 176 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 WRAP53Q9BUR4 548 aaKnown RBP12.28□□□□□ -0.44
USP8-209ENST00000560297 TRIM31Q9BZY9 425 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 CDH19Q9H159 772 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 XAB2Q9HCS7 855 aaKnown RBP12.28□□□□□ -0.44
USP8-209ENST00000560297 RAD18Q9NS91 495 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 BFARQ9NZS9 450 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 WHRNQ9P202 907 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 GGT7Q9UJ14 662 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 ANAPC5Q9UJX4 755 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 RAB23Q9ULC3 237 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.28□□□□□ -0.44
USP8-209ENST00000560297 HCN4Q9Y3Q4 1203 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 ZNF711Q9Y462 761 aa12.28□□□□□ -0.44
USP8-209ENST00000560297 ZNF318Q5VUA4 2279 aa12.27□□□□□ -0.44
USP8-209ENST00000560297 A0A1W2PPC4 97 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 TCRBV7S3A2A0A539 114 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 MAGEB16A2A368 324 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 MEI4A8MW99 385 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 WNT9AO14904 365 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 PPFIA2O75334 1257 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 RECQL5O94762 991 aaPredicted RBP12.27□□□□□ -0.45
USP8-209ENST00000560297 SEC31AO94979 1220 aaKnown RBP12.27□□□□□ -0.45
USP8-209ENST00000560297 PAK4O96013 591 aaPredicted RBP12.27□□□□□ -0.45
USP8-209ENST00000560297 IGHV4-34P06331 123 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 PIRTP0C851 137 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 LPOP22079 712 aaPredicted RBP12.27□□□□□ -0.45
USP8-209ENST00000560297 LHCGRP22888 699 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 CD27P26842 260 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 HMGCLP35914 325 aa12.27□□□□□ -0.45
USP8-209ENST00000560297 GRIA1P42261 906 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms