RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 MS4A14Q96JA4 679 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 SERAC1Q96JX3 654 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 C16orf45Q96MC5 204 aaPredicted RBP12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 FAM118BQ9BPY3 351 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 CD93Q9NPY3 652 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 B4GALT6Q9UBX8 382 aa12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 EIF2B4Q9UI10 523 aaKnown RBP12.09□□□□□ -0.47
RABGGTA-215ENST00000560207 OTOGLQ3ZCN5 2332 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 A6NNZ2 444 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 PLK4O00444 970 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 VILLO15195 856 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 YKT6O15498 198 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 SUN1O94901 812 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 CRTAMO95727 393 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 AP2A1O95782 977 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 PDHA1P08559 390 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 C6P13671 934 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 ITPKAP23677 461 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 PSMB4P28070 264 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 CD38P28907 300 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 HNF1BP35680 557 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 DPTQ07507 201 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 SEMA5AQ13591 1074 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 DHX34Q14147 1143 aaKnown RBP12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 PTK2BQ14289 1009 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 LRRC14Q15048 493 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 PCSK7Q16549 785 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 QPCTQ16769 361 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 WHAMMP3Q1A5X7 153 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 PDPK2PQ6A1A2 396 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 MAATS1Q7Z4T9 603 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 ZSWIM9Q86XI8 627 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 CBARPQ8N350 705 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 MNS1Q8NEH6 495 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 IPMKQ8NFU5 416 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 C1orf216Q8TAB5 229 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 MRGPRX2Q96LB1 330 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 TBL1YQ9BQ87 522 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 AP1M1Q9BXS5 423 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 FRMD8Q9BZ67 464 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 MIR1-1HGQ9H1L0 117 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 ARRDC1-AS1Q9H2J1 176 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 ZFYVE1Q9HBF4 777 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 AASDHPPTQ9NRN7 309 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 FAM86C1Q9NVL1 165 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 PKD2L2Q9NZM6 624 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 NFKBIL1Q9UBC1 381 aaPredicted RBP12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 CDC23Q9UJX2 597 aa12.08□□□□□ -0.48
RABGGTA-215ENST00000560207 WDFY4Q6ZS81 3184 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 TTC24A2A3L6 582 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 IGLON5A6NGN9 336 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 C2orf81A6NN90 581 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 WNT9AO14904 365 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 ZNF185O15231 689 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 MMP20O60882 483 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 GJB3O75712 270 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 PAK4O96013 591 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 KRT14P02533 472 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 HOXC4P09017 264 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 TSHRP16473 764 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 SDHBP21912 280 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 KELP23276 732 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 ADRA1AP35348 466 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 HMGCLP35914 325 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 RABIFP47224 123 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 GDF10P55107 478 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 C21orf59P57076 290 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 PPP2CBP62714 309 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 PPP2CAP67775 309 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 CDH17Q12864 832 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 RALGDSQ12967 914 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 MTM1Q13496 603 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 ACOX1Q15067 660 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 PPP1R7Q15435 360 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 KCTD11Q693B1 232 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 KYAT3Q6YP21 454 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 B4GALNT4Q76KP1 1039 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 ARMCX6Q7L4S7 300 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 NLRP9Q7RTR0 991 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 TMEM145Q8NBT3 493 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 KLHDC7BQ96G42 594 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 OXNAD1Q96HP4 312 aaPredicted RBP12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 NSMCE3Q96MG7 304 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 HINFPQ9BQA5 517 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 GPR63Q9BZJ6 419 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 ERVMER34-1Q9H9K5 563 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 TM9SF3Q9HD45 589 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 RAB6BQ9NRW1 208 aa12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 ZFR2Q9UPR6 939 aaKnown RBP12.07□□□□□ -0.48
RABGGTA-215ENST00000560207 ZNF106Q9H2Y7 1883 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 FAM186AA6NE01 2351 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 C1orf232A0A0U1RR37 186 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 NPIPB15A6NHN6 443 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 SLC31A1O15431 190 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 SPINT1O43278 529 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 GFRA3O60609 400 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 METTL18O95568 372 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms