RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 SATL1Q86VE3 508 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SGMS1Q86VZ5 419 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SDR16C5Q8N3Y7 309 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 C11orf65Q8NCR3 313 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 IDI2Q9BXS1 227 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 KIAA1683Q9H0B3 1180 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 XPNPEP3Q9NQH7 507 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ARHGEF4Q9NR80 690 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 MAGEL2Q9UJ55 1249 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 RAB26Q9ULW5 256 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 M0R129 80 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 KAT7O95251 611 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 TKTL1P51854 596 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF135P52742 658 aaPredicted RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 MYL6P60660 151 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 MC1RQ01726 317 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SNAPC1Q16533 368 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLC30A6Q6NXT4 461 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 SYVN1Q86TM6 617 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 FAM13CQ8NE31 585 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 RIT2Q99578 217 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 MAGEE1Q9HCI5 957 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNHIT2Q9UHR6 403 aa13.88□□□□□ -0.19
CSPG4P12-202ENST00000559989 ARHGEF40Q8TER5 1519 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 BCKDKO14874 412 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZBTB11O95625 1053 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 C15orf59Q2T9L4 293 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF484Q5JVG2 852 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ETNPPLQ8TBG4 499 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 POC1BQ8TC44 478 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 GPSM3Q9Y4H4 160 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 RPTORQ8N122 1335 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 PDE2AO00408 941 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 VAPBO95292 243 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 PGDP52209 483 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 MAPK14Q16539 360 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 GHDCQ8N2G8 530 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ACAT2Q9BWD1 397 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZFP14Q9HCL3 533 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 FAM105AQ9NUU6 356 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 PEX16Q9Y5Y5 336 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 PSMD9O00233 223 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 IPO13O94829 963 aaKnown RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 PROSCO94903 275 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 SCGB1D2O95969 90 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 TPH1P17752 444 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 CD40LGP29965 261 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 TTPAP49638 278 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 LARS2Q15031 903 aaKnown RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 TAF1CQ15572 869 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZSWIM2Q8NEG5 633 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 OR52E6Q96RD3 313 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ELP3Q9H9T3 547 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ABCD2Q9UBJ2 740 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ADGRE2Q9UHX3 823 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 E7ENX8 843 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 RPA1P27694 616 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 MMP13P45452 471 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 PPP3CAQ08209 521 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF697Q5TEC3 545 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 HSDL2Q6YN16 418 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF782Q6ZMW2 699 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 TFAP2DQ7Z6R9 452 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 FAM131BQ86XD5 332 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 WDR49Q8IV35 697 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 CHST13Q8NET6 341 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 RIT1Q92963 219 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 MUC13Q9H3R2 512 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 OTCP00480 354 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLC39A3Q9BRY0 314 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 POLR1EQ9GZS1 481 aaKnown RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 NELFAQ9H3P2 528 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ATP13A1Q9HD20 1204 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 KANSL3Q9P2N6 904 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 PRKAB1Q9Y478 270 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 DGKBQ9Y6T7 804 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 DDX3YO15523 660 aaKnown RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 FGBP02675 491 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 THEGLP0DJG4 465 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ALDH4A1P30038 563 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLC12A3P55017 1021 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZCCHC23Q6ZST2 131 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 SSX6Q7RTT6 188 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 TMC3Q7Z5M5 1100 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 PM20D2Q8IYS1 436 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 TARS2Q9BW92 718 aaKnown RBP13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 ALG9Q9H6U8 611 aa13.87□□□□□ -0.19
CSPG4P12-202ENST00000559989 CLDN25C9JDP6 229 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 ALG1LQ6GMV1 187 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 TP53INP1Q96A56 240 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLC27A6Q9Y2P4 619 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 NFE2Q16621 373 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 CA9Q16790 459 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 USP43Q70EL4 1123 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLC47A2Q86VL8 602 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 NXNL1Q96CM4 212 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms