RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ELFN1P0C7U0 828 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 MAGEA6P43360 314 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 NPY2RP49146 381 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 LIG3P49916 1009 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 PLTPP55058 493 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 RPL6Q02878 288 aaKnown RBP14.38□□□□□ -0.11
SMAD6-204ENST00000559931 TCF15Q12870 199 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 SGCGQ13326 291 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 MTM1Q13496 603 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 SEPT6Q14141 434 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 ACOX1Q15067 660 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 ZNF528Q3MIS6 628 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 TMEM52BQ4KMG9 183 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 DENND5AQ6IQ26 1287 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 LRRC8BQ6P9F7 803 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 CRTC1Q6UUV9 634 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 CEP68Q76N32 757 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 TSPAN33Q86UF1 283 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 HOOK3Q86VS8 718 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 NAT8LQ8N9F0 302 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 MCUQ8NE86 351 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 MCCC1Q96RQ3 725 aaPredicted RBP14.38□□□□□ -0.11
SMAD6-204ENST00000559931 KDM4CQ9H3R0 1056 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 ARNT2Q9HBZ2 717 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 XAB2Q9HCS7 855 aaKnown RBP14.38□□□□□ -0.11
SMAD6-204ENST00000559931 PREBQ9HCU5 417 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 CASS4Q9NQ75 786 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 FAM114A2Q9NRY5 505 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 DMGDHQ9UI17 866 aaKnown RBP14.38□□□□□ -0.11
SMAD6-204ENST00000559931 SPO11Q9Y5K1 396 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 SDK1Q7Z5N4 2213 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 ABCA7Q8IZY2 2146 aa14.38□□□□□ -0.11
SMAD6-204ENST00000559931 CEP192Q8TEP8 1941 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 DOCK9Q9BZ29 2069 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 THADAQ6YHU6 1953 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 A0A1W2PQU0 124 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 IGLON5A6NGN9 336 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 C2orf81A6NN90 581 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 AVILO75366 819 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 TMEM63AO94886 807 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 FSBPO95073 299 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 CRTAMO95727 393 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 MAT2AP31153 395 aaKnown RBP14.37□□□□□ -0.11
SMAD6-204ENST00000559931 MMP12P39900 470 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 DRG2P55039 364 aaKnown RBP14.37□□□□□ -0.11
SMAD6-204ENST00000559931 RPS21P63220 83 aaKnown RBP14.37□□□□□ -0.11
SMAD6-204ENST00000559931 CAV1Q03135 178 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 HLTFQ14527 1009 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMAD6-204ENST00000559931 POU6F1Q14863 301 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 TRADDQ15628 312 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 CERCAMQ5T4B2 595 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 LRRC66Q68CR7 880 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 HIBCHQ6NVY1 386 aaPredicted RBP14.37□□□□□ -0.11
SMAD6-204ENST00000559931 NEK5Q6P3R8 708 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 CASC4Q6P4E1 433 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 LYSMD3Q7Z3D4 306 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 GLT6D1Q7Z4J2 308 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 IFT20Q8IY31 132 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 GAB3Q8WWW8 586 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 SNX19Q92543 992 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 UBXN4Q92575 508 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 KLK6Q92876 244 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 PRRX2Q99811 253 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 TRABDQ9H4I3 376 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 ZFYVE1Q9HBF4 777 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 MBD1Q9UIS9 605 aaPredicted RBP14.37□□□□□ -0.11
SMAD6-204ENST00000559931 ZNF711Q9Y462 761 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 FANCMQ8IYD8 2048 aa14.37□□□□□ -0.11
SMAD6-204ENST00000559931 SDR42E2A6NKP2 422 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 SPINT1O43278 529 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 TM7SF2O76062 418 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 MLNP12872 115 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 ZNF30P17039 623 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 MGAT1P26572 445 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 ARL4CP56559 192 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 RALGDSQ12967 914 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 SRSF5Q13243 272 aaKnown RBP14.36□□□□□ -0.11
SMAD6-204ENST00000559931 LAMB3Q13751 1172 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 CNGA3Q16281 694 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 SEL1L3Q68CR1 1132 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 KIAA0895LQ68EN5 471 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 KIAA1161Q6NSJ0 714 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 LIPIQ6XZB0 460 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 LPCAT2Q7L5N7 544 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 HORMAD1Q86X24 394 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 PDIK1LQ8N165 341 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 BRSK1Q8TDC3 778 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 ATOH1Q92858 354 aaPredicted RBP14.36□□□□□ -0.11
SMAD6-204ENST00000559931 FAM131CQ96AQ9 280 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 SERPINB12Q96P63 405 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 FRMD8Q9BZ67 464 aaPredicted RBP14.36□□□□□ -0.11
SMAD6-204ENST00000559931 C6orf106Q9H6K1 298 aaPredicted RBP14.36□□□□□ -0.11
SMAD6-204ENST00000559931 GRHL1Q9NZI5 618 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.36□□□□□ -0.116e-8■□□□□ 10.2
SMAD6-204ENST00000559931 SAMD15Q9P1V8 674 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 COQ6Q9Y2Z9 468 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 LRRK1Q38SD2 2015 aa14.36□□□□□ -0.11
SMAD6-204ENST00000559931 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.35□□□□□ -0.11
SMAD6-204ENST00000559931 CCDC78A2IDD5 438 aa14.35□□□□□ -0.11
SMAD6-204ENST00000559931 MEI4A8MW99 385 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms