RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LYSMD3Q7Z3D4 306 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 TSPAN33Q86UF1 283 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 RELL1Q8IUW5 271 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 AADATQ8N5Z0 425 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 BRSK1Q8TDC3 778 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 PTCD2Q8WV60 388 aaKnown RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 HNRNPLLQ8WVV9 542 aaKnown RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 EDAQ92838 391 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 PBXIP1Q96AQ6 731 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 SIPA1Q96FS4 1042 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 SCRN2Q96FV2 425 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 TTC25Q96NG3 672 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 HHIPQ96QV1 700 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 RANBP9Q96S59 729 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 OMDQ99983 421 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 KIFC1Q9BW19 673 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 OSBPL6Q9BZF3 934 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 PABPC3Q9H361 631 aaKnown RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 MRM3Q9HC36 420 aaKnown RBP10.46□□□□□ -0.73
TPM1-221ENST00000559831 MAGEE1Q9HCI5 957 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 LRRC4CQ9HCJ2 640 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 C2orf42Q9NWW7 574 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 SLC2A6Q9UGQ3 507 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 GGT7Q9UJ14 662 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 ITM2BQ9Y287 266 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 SIT1Q9Y3P8 196 aa10.46□□□□□ -0.73
TPM1-221ENST00000559831 NUMA1Q14980 2115 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 DOCK9Q9BZ29 2069 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 TRPM6Q9BX84 2022 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 MAGEB16A2A368 324 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 GOLGA8CPA6NN73 597 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 C2orf81A6NN90 581 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 CCL22O00626 93 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 NEMP1O14524 444 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 STX7O15400 261 aaKnown RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 RIPK2O43353 540 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 LDB2O43679 373 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 USP1O94782 785 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 CLDN7O95471 211 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 TTC4O95801 387 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 PDGFBP01127 241 aaPredicted RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 POLBP06746 335 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 GABRG2P18507 467 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 NDUFV2P19404 249 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 LPOP22079 712 aaPredicted RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 PHBP35232 272 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 HSD17B3P37058 310 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 P2RY2P41231 377 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 DGKEP52429 567 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 GPX6P59796 221 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 CBLBQ13191 982 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 LAMB3Q13751 1172 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 CRYMQ14894 314 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 UAP1Q16222 522 aaPredicted RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 ANKRD20A4Q4UJ75 823 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 SPANXN3Q5MJ09 141 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 TSTD2Q5T7W7 516 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 PIP5KL1Q5T9C9 394 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 STEAP4Q687X5 459 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 LRRC66Q68CR7 880 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 ESRP1Q6NXG1 681 aaKnown RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 CRTC1Q6UUV9 634 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 C3orf62Q6ZUJ4 267 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 DPPA4Q7L190 304 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 NLRP9Q7RTR0 991 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 CCNJLQ8IV13 435 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 TTC30BQ8N4P2 665 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 MREGQ8N565 214 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
TPM1-221ENST00000559831 TSTD1Q8NFU3 115 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 OR4K2Q8NGD2 314 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 OR13C4Q8NGS5 318 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 GSDMBQ8TAX9 411 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 ANKRD7Q92527 254 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 CLDN23Q96B33 292 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 MFSD3Q96ES6 412 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 DNAJC1Q96KC8 554 aaKnown RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 MRGPRX1Q96LB2 322 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 ZNF778Q96MU6 729 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 FCRL3Q96P31 734 aaPredicted RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 MCCC1Q96RQ3 725 aaPredicted RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 SRPK1Q96SB4 655 aaKnown RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 NAT9Q9BTE0 207 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 WRAP53Q9BUR4 548 aaKnown RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 HDAC8Q9BY41 377 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 CHRDQ9H2X0 955 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 TRABDQ9H4I3 376 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 ZFYVE1Q9HBF4 777 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 CD248Q9HCU0 757 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 BPIFA1Q9NP55 256 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 PPANQ9NQ55 473 aaKnown RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 FBXL12Q9NXK8 326 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 SERGEFQ9UGK8 458 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 FNDC3AQ9Y2H6 1198 aaKnown RBP10.45□□□□□ -0.74
TPM1-221ENST00000559831 PPIL1Q9Y3C6 166 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 PKP3Q9Y446 797 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 TECTAO75443 2155 aa10.45□□□□□ -0.74
TPM1-221ENST00000559831 PLXNA2O75051 1894 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 COL6A3P12111 3177 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 MROH6A6NGR9 719 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms