RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
LRRC28-214ENST00000559433 PLA2G15Q8NCC3 412 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 ATL2Q8NHH9 583 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 HDAC11Q96DB2 347 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 IL12RB2Q99665 862 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 APOOQ9BUR5 198 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 TCEAL2Q9H3H9 227 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-214ENST00000559433 NCKIPSDQ9NZQ3 722 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 SPASTQ9UBP0 616 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 AMACRQ9UHK6 382 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 PHTF1Q9UMS5 762 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 TFR2Q9UP52 801 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 DOLKQ9UPQ8 538 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 CSNK1G3Q9Y6M4 447 aa12.63□□□□□ -0.39
LRRC28-214ENST00000559433 TRABD2BA6NFA1 517 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 SOWAHDA6NJG2 315 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 PSTPIP1O43586 416 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 HLA-DQB2P05538 268 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 GIMD1P0DJR0 217 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 CTSEP14091 401 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 ZFXP17010 805 aaPredicted RBP12.62□□□□□ -0.39
LRRC28-214ENST00000559433 CTPS1P17812 591 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 GM2AP17900 193 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 CA4P22748 312 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 CES1P23141 567 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 BLKP51451 505 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 EPHB1P54762 984 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 HADHBP55084 474 aaKnown RBP12.62□□□□□ -0.39
LRRC28-214ENST00000559433 DYNLT1P63172 113 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 PPIDQ08752 370 aaKnown RBP12.62□□□□□ -0.39
LRRC28-214ENST00000559433 CNGA3Q16281 694 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 PRRT3Q5FWE3 981 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 SLC9A4Q6AI14 798 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 ALG1LQ6GMV1 187 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 ENPP7Q6UWV6 458 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 USP45Q70EL2 814 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 NDUFAF2Q8N183 169 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 SCG3Q8WXD2 468 aaKnown RBP12.62□□□□□ -0.39
LRRC28-214ENST00000559433 NUS1Q96E22 293 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 APOLD1Q96LR9 279 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 LGMNQ99538 433 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 LRRC61Q9BV99 259 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 GOLPH3Q9H4A6 298 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 USP29Q9HBJ7 922 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 KLQ9UEF7 1012 aa12.62□□□□□ -0.39
LRRC28-214ENST00000559433 PNMA8BQ9ULN7 279 aaPredicted RBP12.62□□□□□ -0.39
LRRC28-214ENST00000559433 NPIPB15A6NHN6 443 aaPredicted RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 SRRM3A6NNA2 597 aaPredicted RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 KCNK1O00180 336 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 CACNB4O00305 520 aaPredicted RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 PPP1R12AO14974 1030 aaPredicted RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 HEXIM1O94992 359 aaKnown RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 NDUFA10O95299 355 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 IPO7O95373 1038 aaKnown RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 ANXA6P08133 673 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 PDHA1P08559 390 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 ALPIP09923 528 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 CKMT1AP12532 417 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 MYF5P13349 255 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 LHCGRP22888 699 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 RPIAP49247 311 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 CLDN6P56747 220 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 AP1B1Q10567 949 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 C1orf61Q13536 156 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 ARHGEF7Q14155 803 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 PDK1Q15118 436 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 ALG11Q2TAA5 492 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 HES3Q5TGS1 186 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 C11orf63Q6NUN7 778 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 ZCCHC8Q6NZY4 707 aaKnown RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 NPNTQ6UXI9 565 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 RD3Q7Z3Z2 195 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 TMTC1Q8IUR5 882 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 HID1Q8IV36 788 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 FAM181AQ8N9Y4 354 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 TPCN2Q8NHX9 752 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 PIH1D2Q8WWB5 315 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 TSACCQ96A04 125 aaPredicted RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 SCRN2Q96FV2 425 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 TBATAQ96M53 351 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 COQ10AQ96MF6 247 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 WDR92Q96MX6 357 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 MCCC1Q96RQ3 725 aaPredicted RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 TDRD1Q9BXT4 1180 aaKnown RBP12.61□□□□□ -0.39
LRRC28-214ENST00000559433 ALG6Q9Y672 507 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 AK5Q9Y6K8 562 aa12.61□□□□□ -0.39
LRRC28-214ENST00000559433 A0A0A6YYK5 440 aaPredicted RBP12.6□□□□□ -0.39
LRRC28-214ENST00000559433 CPED1A4D0V7 1026 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 GOLGA6CA6NDK9 693 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 GOLGA6BA6NDN3 693 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 FZD6O60353 706 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 GCATO75600 419 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 RASGRP1O95267 797 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 JCHAINP01591 159 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 GOLGA6DP0CG33 693 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 FECHP22830 423 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 ETV3P41162 512 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 CDKN2BP42772 138 aa12.6□□□□□ -0.39
LRRC28-214ENST00000559433 HK3P52790 923 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms