RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 TNFRSF10CO14798 259 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 TNFSF15O95150 251 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 PEX11BO96011 259 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 RPLP0P05388 317 aaKnown RBP14.98□□□□□ -0.01
LRRC28-213ENST00000559399 ITGA2BP08514 1039 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 HOXC4P09017 264 aaPredicted RBP14.98□□□□□ -0.01
LRRC28-213ENST00000559399 GM2AP17900 193 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 SKOR1P84550 965 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 EIF3IQ13347 325 aaKnown RBP14.98□□□□□ -0.01
LRRC28-213ENST00000559399 PIGHQ14442 188 aaPredicted RBP14.98□□□□□ -0.01
LRRC28-213ENST00000559399 TDRD12Q587J7 1177 aaKnown RBP14.98□□□□□ -0.01
LRRC28-213ENST00000559399 CAVIN1Q6NZI2 390 aaKnown RBP14.98□□□□□ -0.01
LRRC28-213ENST00000559399 POLNQ7Z5Q5 900 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 TAF8Q7Z7C8 310 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 CLEC14AQ86T13 490 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 BBS5Q8N3I7 341 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 LIN37Q96GY3 246 aaPredicted RBP14.98□□□□□ -0.01
LRRC28-213ENST00000559399 NSMCE3Q96MG7 304 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 CSPG4P5Q96PW8 444 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 GFM1Q96RP9 751 aaKnown RBP14.98□□□□□ -0.01
LRRC28-213ENST00000559399 MGME1Q9BQP7 344 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 EPB41L5Q9HCM4 733 aa14.98□□□□□ -0.01
LRRC28-213ENST00000559399 DOCK9Q9BZ29 2069 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 TTC24A2A3L6 582 aaPredicted RBP14.97□□□□□ -0.01
LRRC28-213ENST00000559399 TMX2-CTNND1H3BSU7 103 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 ERVH48-1M5A8F1 160 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 PDE2AO00408 941 aaPredicted RBP14.97□□□□□ -0.01
LRRC28-213ENST00000559399 HTRA2O43464 458 aaPredicted RBP14.97□□□□□ -0.01
LRRC28-213ENST00000559399 C1QL1O75973 258 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 CPP00450 1065 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 TCF4P15884 667 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 GLB1P16278 677 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 CR2P20023 1033 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 AMPD1P23109 780 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 NFKBIAP25963 317 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 SERPINB6P35237 376 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 TRIM23P36406 574 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 CCL7P80098 99 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 RHDQ02161 417 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 NR1I3Q14994 352 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 ARHGAP40Q5TG30 622 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 PNCKQ6P2M8 343 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 B3GNT8Q7Z7M8 397 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 ATPAF2Q8N5M1 289 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 FAM46DQ8NEK8 389 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 GPR156Q8NFN8 814 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 PDCD6IPQ8WUM4 868 aaKnown RBP14.97□□□□□ -0.01
LRRC28-213ENST00000559399 NSMCE1Q8WV22 266 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 NUS1Q96E22 293 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 COQ10AQ96MF6 247 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 NUDCD1Q96RS6 583 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.97□□□□□ -0.01
LRRC28-213ENST00000559399 STRADBQ9C0K7 418 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 LRRN3Q9H3W5 708 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 MRPL40Q9NQ50 206 aaKnown RBP14.97□□□□□ -0.01
LRRC28-213ENST00000559399 PCDHGC4Q9Y5F7 938 aa14.97□□□□□ -0.01
LRRC28-213ENST00000559399 BZW2Q9Y6E2 419 aaKnown RBP14.97□□□□□ -0.01
LRRC28-213ENST00000559399 FASNP49327 2511 aaKnown RBP14.96□□□□□ -0.01
LRRC28-213ENST00000559399 A0A1W2PQM1 296 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 PLD2O14939 933 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 MAFKO60675 156 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 HEXIM1O94992 359 aaKnown RBP14.96□□□□□ -0.01
LRRC28-213ENST00000559399 RARAP10276 462 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 MYCLP1P12525 358 aaPredicted RBP14.96□□□□□ -0.01
LRRC28-213ENST00000559399 VIPR1P32241 457 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 INHBCP55103 352 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 IQCB1Q15051 598 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 CNGA3Q16281 694 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 TSR1Q2NL82 804 aaKnown RBP14.96□□□□□ -0.01
LRRC28-213ENST00000559399 CERCAMQ5T4B2 595 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 HGSNATQ68CP4 663 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 OGFOD3Q6PK18 319 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 CCNJLQ8IV13 435 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 PGBD5Q8N414 524 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 FBXO39Q8N4B4 442 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 NIPA2Q8N8Q9 360 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 TEKT4Q8WW24 435 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 TMEM74Q96NL1 305 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 LGR4Q9BXB1 951 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 FOXP3Q9BZS1 431 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 TMEM168Q9H0V1 697 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 THAP2Q9H0W7 228 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 NOD2Q9HC29 1040 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 PCDH18Q9HCL0 1135 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 CYP4F12Q9HCS2 524 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 ETNK2Q9NVF9 386 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 KCTD5Q9NXV2 234 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 IP6K2Q9UHH9 426 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 MOSPD1Q9UJG1 213 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 APPL1Q9UKG1 709 aa14.96□□□□□ -0.01
LRRC28-213ENST00000559399 A0A1W2PQJ5 194 aa14.95□□□□□ -0.02
LRRC28-213ENST00000559399 PRSS38A1L453 326 aa14.95□□□□□ -0.02
LRRC28-213ENST00000559399 B4DGG1 531 aa14.95□□□□□ -0.02
LRRC28-213ENST00000559399 NOBOXO60393 691 aa14.95□□□□□ -0.02
LRRC28-213ENST00000559399 CYP2A6P11509 494 aaPredicted RBP14.95□□□□□ -0.02
LRRC28-213ENST00000559399 CCKBRP32239 447 aa14.95□□□□□ -0.02
LRRC28-213ENST00000559399 MMP13P45452 471 aa14.95□□□□□ -0.02
LRRC28-213ENST00000559399 CDH6P55285 790 aa14.95□□□□□ -0.02
LRRC28-213ENST00000559399 MAXP61244 160 aa14.95□□□□□ -0.02
LRRC28-213ENST00000559399 TPM4P67936 248 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms