RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 LMNAP02545 664 aaKnown RBP21.73■■□□□ 1.07
SNX1-206ENST00000559389 MAOBP27338 520 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 HOXD12P35452 270 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 DPP6P42658 865 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 PTGIRP43119 386 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 VPS41P49754 854 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 SPARCL1Q14515 664 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 LRRC66Q68CR7 880 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 CRTC1Q6UUV9 634 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 SLC25A41Q8N5S1 370 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 KLK6Q92876 244 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 LRRC45Q96CN5 670 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 PHOX2BQ99453 314 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 APOL2Q9BQE5 337 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 SLC17A9Q9BYT1 436 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 EIF2B3Q9NR50 452 aaKnown RBP21.73■■□□□ 1.07
SNX1-206ENST00000559389 PILRBQ9UKJ0 227 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 SLCO1B1Q9Y6L6 691 aa21.73■■□□□ 1.07
SNX1-206ENST00000559389 E7EVH7 732 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 USP12O75317 370 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 TM7SF2O76062 418 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 PIRTP0C851 137 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 ZNF30P17039 623 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 GM2AP17900 193 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 BASP1P80723 227 aaKnown RBP21.72■■□□□ 1.07
SNX1-206ENST00000559389 CREB5Q02930 508 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 C2orf54Q08AI8 447 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 GPS1Q13098 491 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 PTK6Q13882 451 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 TUBB2AQ13885 445 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 ARHGEF7Q14155 803 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 AGERQ15109 404 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 CDKN3Q16667 212 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 NAPEPLDQ6IQ20 393 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 SYT12Q8IV01 421 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 RGL4Q8IZJ4 473 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 C1orf216Q8TAB5 229 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 SRPK1Q96SB4 655 aaKnown RBP21.72■■□□□ 1.07
SNX1-206ENST00000559389 TUBB2BQ9BVA1 445 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 ARNT2Q9HBZ2 717 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 MAGEE1Q9HCI5 957 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 COQ6Q9Y2Z9 468 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 ZNF711Q9Y462 761 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 SPO11Q9Y5K1 396 aa21.72■■□□□ 1.07
SNX1-206ENST00000559389 A0A0U1RQS6 177 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 C1orf232A0A0U1RR37 186 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 SLC31A1O15431 190 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 ZNF500O60304 480 aaPredicted RBP21.71■■□□□ 1.07
SNX1-206ENST00000559389 SUN1O94901 812 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 APRTP07741 180 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 RETP07949 1114 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 C1SP09871 688 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 HNRNPA2B1P22626 353 aaKnown RBP21.71■■□□□ 1.07
SNX1-206ENST00000559389 MPLP40238 635 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 STC1P52823 247 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 DR1Q01658 176 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 DENND5AQ6IQ26 1287 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 LYSMD3Q7Z3D4 306 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 CBARPQ8N350 705 aaPredicted RBP21.71■■□□□ 1.07
SNX1-206ENST00000559389 ZCCHC9Q8N567 271 aaKnown RBP21.71■■□□□ 1.07
SNX1-206ENST00000559389 TMEM145Q8NBT3 493 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 DENND6BQ8NEG7 585 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 COQ10AQ96MF6 247 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 SLC6A18Q96N87 628 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 C1QTNF7Q9BXJ2 289 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 MIR1-1HGQ9H1L0 117 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 TMEM74BQ9NUR3 256 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 SUSD2Q9UGT4 822 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 GMEB2Q9UKD1 530 aa21.71■■□□□ 1.07
SNX1-206ENST00000559389 SCN8AQ9UQD0 1980 aa21.7■■□□□ 1.07
SNX1-206ENST00000559389 TRPM6Q9BX84 2022 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 PRAMEF26H0Y7S4 382 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 LZTS3O60299 673 aaPredicted RBP21.7■■□□□ 1.06
SNX1-206ENST00000559389 RECQL5O94762 991 aaPredicted RBP21.7■■□□□ 1.06
SNX1-206ENST00000559389 MAGEA6P43360 314 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 SGCGQ13326 291 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 DHX34Q14147 1143 aaKnown RBP21.7■■□□□ 1.06
SNX1-206ENST00000559389 PPP1R7Q15435 360 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 SYDE1Q6ZW31 735 aaPredicted RBP21.7■■□□□ 1.06
SNX1-206ENST00000559389 HSD11B1LQ7Z5J1 315 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 LINC00523Q86TU6 105 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 JAMLQ86YT9 394 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 CCHCR1Q8TD31 782 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 PIGKQ92643 395 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 SERAC1Q96JX3 654 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 KRT12Q99456 494 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 KLF6Q99612 283 aaPredicted RBP21.7■■□□□ 1.06
SNX1-206ENST00000559389 TM9SF3Q9HD45 589 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 FZD3Q9NPG1 666 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 HACD3Q9P035 362 aa21.7■■□□□ 1.06
SNX1-206ENST00000559389 WDFY4Q6ZS81 3184 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 ESPNB1AK53 854 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 RAD51BO15315 384 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 CLDN7O95471 211 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 PAK4O96013 591 aaPredicted RBP21.69■■□□□ 1.06
SNX1-206ENST00000559389 AKT2P31751 481 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 LMAN1P49257 510 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 KCNJ11Q14654 390 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 ACOX1Q15067 660 aa21.69■■□□□ 1.06
SNX1-206ENST00000559389 TP53I13Q8NBR0 393 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms