RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 DBHP09172 617 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 CYP11B1P15538 503 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 C5AR1P21730 350 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 RRM1P23921 792 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 ANP32AP39687 249 aaKnown RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 KLK7P49862 253 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 DNA2P51530 1060 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 ADPRHP54922 357 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 BPIFB4P59827 614 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 SULT2A1Q06520 285 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 ELAVL3Q14576 367 aaKnown RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 DLG2Q15700 870 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 CDO1Q16878 200 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 TSNAXIP1Q2TAA8 658 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 ALFQ53S48 1182 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 MIIPQ5JXC2 388 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 TMEM201Q5SNT2 666 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 KLHDC7AQ5VTJ3 777 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 OTUD1Q5VV17 481 aaPredicted RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 CXorf57Q6NSI4 855 aaKnown RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 BEND5Q7L4P6 421 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 SLC26A9Q7LBE3 791 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 B3GNT8Q7Z7M8 397 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 DSG4Q86SJ6 1040 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 NOP9Q86U38 636 aaKnown RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 ERICH1Q86X53 443 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 FAM131BQ86XD5 332 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 DRC7Q8IY82 874 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 ATP11CQ8NB49 1132 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 OR2T34Q8NGX1 318 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 SLC20A1Q8WUM9 679 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 VPS16Q9H269 839 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 WDCPQ9H6R7 721 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 NLRC4Q9NPP4 1024 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 FAM207AQ9NSI2 230 aaPredicted RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 SEPT11Q9NVA2 429 aaKnown RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 ASNSD1Q9NWL6 643 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 FTSJ1Q9UET6 329 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 SCML1Q9UN30 329 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 CA5BQ9Y2D0 317 aa7.5□□□□□ -1.21
SPG11-213ENST00000558988 TP53BP1Q12888 1972 aaPredicted RBP7.5□□□□□ -1.21
SPG11-213ENST00000558988 SRRM3A6NNA2 597 aaPredicted RBP7.49□□□□□ -1.21
SPG11-213ENST00000558988 F8VZ95 297 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 SLC31A1O15431 190 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 SDC3O75056 442 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 CBFA2T3O75081 653 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 GJB6O95452 261 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 MT-CO1P00395 513 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 WNT1P04628 370 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 ITGAVP06756 1048 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 TPM2P07951 284 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 ZNF883P0CG24 379 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 UCHL3P15374 230 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 PRLRP16471 622 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 GOT1P17174 413 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 ERCC5P28715 1186 aaPredicted RBP7.49□□□□□ -1.21
SPG11-213ENST00000558988 CD38P28907 300 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 OR1E1P30953 314 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 FLT3P36888 993 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 GRK6P43250 576 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 CLDN6P56747 220 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 POLR2FP61218 127 aaKnown RBP7.49□□□□□ -1.21
SPG11-213ENST00000558988 RACK1P63244 317 aaKnown RBP7.49□□□□□ -1.21
SPG11-213ENST00000558988 PRR5P85299 388 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 SCAPQ12770 1279 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 CNTN1Q12860 1018 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 SLC12A1Q13621 1099 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 INAVAQ3KP66 663 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 SLC45A4Q5BKX6 768 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 TCP11X2Q5H9J9 407 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 FAM46CQ5VWP2 391 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 DHRS13Q6UX07 377 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 LRRC31Q6UY01 552 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 FAM71AQ8IYT1 594 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 LGI4Q8N135 537 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 EMC1Q8N766 993 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 MSANTD4Q8NCY6 345 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 OR7D4Q8NG98 312 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 PIP4K2CQ8TBX8 421 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 MDM1Q8TC05 714 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 FRS2Q8WU20 508 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 ADAMTS14Q8WXS8 1223 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 SKA1Q96BD8 255 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 C18orf8Q96DM3 657 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 CFAP57Q96MR6 1250 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 SPAG5Q96R06 1193 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 PPP1R9BQ96SB3 815 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 NPY6RQ99463 290 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 CDC6Q99741 560 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 C11orf70Q9BRQ4 267 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 FEM1AQ9BSK4 669 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 C12orf49Q9H741 205 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 EBF2Q9HAK2 575 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 ANLNQ9NQW6 1124 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 METTL5Q9NRN9 209 aaKnown RBP7.49□□□□□ -1.21
SPG11-213ENST00000558988 VPS51Q9UID3 782 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 SARDHQ9UL12 918 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 FZD4Q9ULV1 537 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 CABIN1Q9Y6J0 2220 aa7.49□□□□□ -1.21
SPG11-213ENST00000558988 PCSK5Q92824 1860 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms