RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 FRYQ5TBA9 3013 aa21.54■■□□□ 1.04
CRNDE-205ENST00000558952 SPEGQ15772 3267 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 KMT2BQ9UMN6 2715 aaPredicted RBP21.53■■□□□ 1.04
CRNDE-205ENST00000558952 TDRD6O60522 2096 aaKnown RBP21.53■■□□□ 1.04
CRNDE-205ENST00000558952 ZNF487B1APH4 448 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 GCATO75600 419 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 KRT1P04264 644 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 ALPIP09923 528 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 CCNB1P14635 433 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 TSHRP16473 764 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 CA4P22748 312 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 KIAA1024LP59773 190 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 SRP54P61011 504 aaKnown RBP21.53■■□□□ 1.04
CRNDE-205ENST00000558952 CYP4F3Q08477 520 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 NR0B2Q15466 257 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 CNGA3Q16281 694 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 CDKN3Q16667 212 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 ALG11Q2TAA5 492 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 VSIG1Q86XK7 387 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 RHOT1Q8IXI2 618 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 CCDC13Q8IYE1 715 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 CACTIN-AS1Q8N1I8 211 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.53■■□□□ 1.04
CRNDE-205ENST00000558952 IFI44Q8TCB0 444 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 HDAC11Q96DB2 347 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 NUS1Q96E22 293 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 SCRN2Q96FV2 425 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 WDR26Q9H7D7 661 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 DTLQ9NZJ0 730 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 DKK4Q9UBT3 224 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 ASPMQ8IZT6 3477 aa21.53■■□□□ 1.04
CRNDE-205ENST00000558952 AKAP13Q12802 2813 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 CPED1A4D0V7 1026 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 SPOPO43791 374 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 HEXIM1O94992 359 aaKnown RBP21.52■■□□□ 1.04
CRNDE-205ENST00000558952 MT-CO3P00414 261 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 TNFP01375 233 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 TNNT1P13805 278 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 MAGEA1P43355 309 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 NOP2P46087 812 aaKnown RBP21.52■■□□□ 1.04
CRNDE-205ENST00000558952 EPHB1P54762 984 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 C6orf132Q5T0Z8 1188 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 LRRC38Q5VT99 294 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 ESRP1Q6NXG1 681 aaKnown RBP21.52■■□□□ 1.04
CRNDE-205ENST00000558952 GKN2Q86XP6 184 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 TC2NQ8N9U0 490 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 OR56A4Q8NGH8 313 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 TPCN2Q8NHX9 752 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 MAPK15Q8TD08 544 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 FUBP1Q96AE4 644 aaKnown RBP21.52■■□□□ 1.04
CRNDE-205ENST00000558952 COQ10AQ96MF6 247 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 LUC7LQ9NQ29 371 aaKnown RBP21.52■■□□□ 1.04
CRNDE-205ENST00000558952 DDX56Q9NY93 547 aaKnown RBP21.52■■□□□ 1.04
CRNDE-205ENST00000558952 HEY1Q9Y5J3 304 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 USP24Q9UPU5 2620 aa21.52■■□□□ 1.04
CRNDE-205ENST00000558952 SHROOM3Q8TF72 1996 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 LY6G6EA0A0G2JKS1 128 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 PSMD11O00231 422 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 TAF4O00268 1085 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 PDE2AO00408 941 aaPredicted RBP21.51■■□□□ 1.03
CRNDE-205ENST00000558952 APOL1O14791 398 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 YY2O15391 372 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 OPA1O60313 960 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 ZFXP17010 805 aaPredicted RBP21.51■■□□□ 1.03
CRNDE-205ENST00000558952 CTPS1P17812 591 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 GM2AP17900 193 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 DSC2Q02487 901 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 SLC10A2Q12908 348 aaPredicted RBP21.51■■□□□ 1.03
CRNDE-205ENST00000558952 TCEAL1Q15170 157 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 SPA17Q15506 151 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 ALG1LQ6GMV1 187 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 PNCKQ6P2M8 343 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 EFL1Q7Z2Z2 1120 aaKnown RBP21.51■■□□□ 1.03
CRNDE-205ENST00000558952 SDR16C5Q8N3Y7 309 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 MCCC1Q96RQ3 725 aaPredicted RBP21.51■■□□□ 1.03
CRNDE-205ENST00000558952 BOCQ9BWV1 1114 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 CLPBQ9H078 707 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 AK5Q9Y6K8 562 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 U3KQA8 63 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 LRRK1Q38SD2 2015 aa21.51■■□□□ 1.03
CRNDE-205ENST00000558952 CACNA1BQ00975 2339 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 NPIPB15A6NHN6 443 aaPredicted RBP21.5■■□□□ 1.03
CRNDE-205ENST00000558952 HOXC4P09017 264 aaPredicted RBP21.5■■□□□ 1.03
CRNDE-205ENST00000558952 TCEA2Q15560 299 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 SLC9A4Q6AI14 798 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 LVRNQ6Q4G3 990 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 RFX6Q8HWS3 928 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 CCDC170Q8IYT3 715 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 PLD5Q8N7P1 536 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 DCBLD1Q8N8Z6 715 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 LRRN4Q8WUT4 740 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 PIH1D2Q8WWB5 315 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 NAT6Q93015 286 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 RNF25Q96BH1 459 aaPredicted RBP21.5■■□□□ 1.03
CRNDE-205ENST00000558952 PDXPQ96GD0 296 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 NRSN2Q9GZP1 204 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 PHPT1Q9NRX4 125 aaPredicted RBP21.5■■□□□ 1.03
CRNDE-205ENST00000558952 MOSPD1Q9UJG1 213 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 PPIL1Q9Y3C6 166 aa21.5■■□□□ 1.03
CRNDE-205ENST00000558952 DGKBQ9Y6T7 804 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms