RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 IFT43Q96FT9 208 aa12.56□□□□□ -0.4
SMAD3-208ENST00000558827 MGME1Q9BQP7 344 aa12.56□□□□□ -0.4
SMAD3-208ENST00000558827 LGR4Q9BXB1 951 aa12.56□□□□□ -0.4
SMAD3-208ENST00000558827 CD84Q9UIB8 345 aa12.56□□□□□ -0.4
SMAD3-208ENST00000558827 DOLKQ9UPQ8 538 aa12.56□□□□□ -0.4
SMAD3-208ENST00000558827 CHKBQ9Y259 395 aa12.56□□□□□ -0.4
SMAD3-208ENST00000558827 AK5Q9Y6K8 562 aa12.56□□□□□ -0.4
SMAD3-208ENST00000558827 NPIPB15A6NHN6 443 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-208ENST00000558827 KCNK1O00180 336 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 AGRPO00253 132 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 HTRA2O43464 458 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-208ENST00000558827 OPA1O60313 960 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 RASGRP1O95267 797 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 JCHAINP01591 159 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 HLA-DQB2P05538 268 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 C1SP09871 688 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 CKMT1AP12532 417 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 LHCGRP22888 699 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 VIPR1P32241 457 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 HSPA9P38646 679 aaKnown RBP12.55□□□□□ -0.4
SMAD3-208ENST00000558827 ETV3P41162 512 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 MAGEA1P43355 309 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 SRP54P61011 504 aaKnown RBP12.55□□□□□ -0.4
SMAD3-208ENST00000558827 NIPAL4Q0D2K0 466 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 ARMC12Q5T9G4 340 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 PROSER1Q86XN7 944 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 MAP7D3Q8IWC1 876 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 SLC35F3Q8IY50 421 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
SMAD3-208ENST00000558827 TC2NQ8N9U0 490 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 MAPK15Q8TD08 544 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 BTN2A2Q8WVV5 523 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 OR1E3Q8WZA6 343 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 PDXPQ96GD0 296 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 DCBLD2Q96PD2 775 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 RNF157Q96PX1 679 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 LGMNQ99538 433 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 ZNF670Q9BS34 389 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 ABCG4Q9H172 646 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 SEPT10Q9P0V9 454 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 RCOR3Q9P2K3 495 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-208ENST00000558827 KLQ9UEF7 1012 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 CLCA2Q9UQC9 943 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 PCDHB1Q9Y5F3 818 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 CFAP47Q6ZTR5 3102 aa12.55□□□□□ -0.4
SMAD3-208ENST00000558827 MATN3O15232 486 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 HEXIM1O94992 359 aaKnown RBP12.54□□□□□ -0.4
SMAD3-208ENST00000558827 PGLSO95336 258 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 CCNB1P14635 433 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 COMTP21964 271 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 HTR1BP28222 390 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 HNF1BP35680 557 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 HK3P52790 923 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 EPHB1P54762 984 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 MTM1Q13496 603 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 IFI16Q16666 785 aaKnown RBP12.54□□□□□ -0.4
SMAD3-208ENST00000558827 KAZNQ674X7 775 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 Q6ZVL8 140 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 KDELC2Q7Z4H8 507 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 CNGA4Q8IV77 575 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 TEX26Q8N6G2 289 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 CCL4L1Q8NHW4 92 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-208ENST00000558827 PTCD2Q8WV60 388 aaKnown RBP12.54□□□□□ -0.4
SMAD3-208ENST00000558827 PIH1D2Q8WWB5 315 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 FAF2Q96CS3 445 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 NUS1Q96E22 293 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 COQ10AQ96MF6 247 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 WDR92Q96MX6 357 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 DUSP23Q9BVJ7 150 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 MAK16Q9BXY0 300 aaKnown RBP12.54□□□□□ -0.4
SMAD3-208ENST00000558827 CYP4F12Q9HCS2 524 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 FGF22Q9HCT0 170 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 DTLQ9NZJ0 730 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 PHTF1Q9UMS5 762 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 CSNK1G3Q9Y6M4 447 aa12.54□□□□□ -0.4
SMAD3-208ENST00000558827 KIF26BQ2KJY2 2108 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 FREM2Q5SZK8 3169 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 C3orf70A6NLC5 250 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-208ENST00000558827 CACNB4O00305 520 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-208ENST00000558827 SPOPO43791 374 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 SOCS5O75159 536 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 TNFP01375 233 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 CYP2A6P11509 494 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-208ENST00000558827 KRT10P13645 584 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 TGM2P21980 687 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 CCNCP24863 283 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 MAN1A1P33908 653 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 POLD2P49005 469 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 PEX5P50542 639 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 DUSP3P51452 185 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-208ENST00000558827 ZNF75DP51815 510 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 E2F1Q01094 437 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 AP1B1Q10567 949 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 ILKQ13418 452 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 ARHGEF7Q14155 803 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 NR0B2Q15466 257 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 ODF2Q5BJF6 829 aa12.53□□□□□ -0.4
SMAD3-208ENST00000558827 ZCCHC8Q6NZY4 707 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms